Xenia sp. Carnegie-2017 (soft corals): 124449331
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Entry
124449331 CDS
T08024
Name
(RefSeq) LOW QUALITY PROTEIN: zinc phosphodiesterase ELAC protein 2-like
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xen03016
]
124449331
Enzymes [BR:
xen01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
124449331
Transfer RNA biogenesis [BR:
xen03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
124449331
Prokaryotic type
124449331
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_4
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B
Motif
Other DBs
NCBI-GeneID:
124449331
NCBI-ProteinID:
XP_046856220
LinkDB
All DBs
Position
Unknown
AA seq
788 aa
AA seq
DB search
MSKGFRPHIKVANNVKAKKNVNLKPTATAYLQIFGTGSGDTNPSIFLFADSQRYVFSCGE
STQRLFNEHKLKLGKINNIFLTQLKWPFFGGVPGLLLTLREANKASVNLHGPQGTTDLLR
ASKGFLSMGNLDLRITEYVCNGDKGIYKDENIVVKAIPIKGNREENFIEENFHCYCDSIC
EPKKNFSYGSEITKLLQCDDMLERAKRLKWISTRGLWSIMCELVSMRVKXIXKATDLNVP
KGPLLGRLQKGEDVVLGNGTKVRSSDVMEKSSAGPIFCIIDCPSMYYLKQLVSNDVLLSC
QLYKDNLTPIIMIHLTPEDVVKEPEYKAWLERFGPECQHLFLNEVMCPAKISMLSQLGIQ
YCLNQLNPRLFPPLFATEKSNHDDLPANWSVGEPYLIYHLRPTTIQGYDRIEISRKWDML
TSKVTERMKCLKSSEEFTLLQMRNALNQFINPEKFVEIAKEKIKTANEKRHISKESNEMD
KELSVVFLGTGASLPSKFRNVSCMLVHLSDEQSILLDCGEGSYGQLYRHYGPNLHKVLLQ
LCCIFISHMHADHHLGLISVLQAWKRCIDSCPREERPEPIVVIAPSFLYDWLHYYGTFCD
TLNFRFYDSRKFVAGVQTEADNILSSLLHAKVSIVPVVHCPHAFGLVLSHTKGWKLVYSG
DTRPCEALIKEGLDATLVIHEATLEDDLYNEAVAKQHSTTSEAIECGQKMKAKFTLLTHF
SQRYPKIPIFNTKFNDCVGIAFDHMMVNFDNLSDLPQLLRPLKAIFKEEFDEQSKNSRFI
NSLQVNIY
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaggttttagacctcatataaaggttgccaataacgttaaagctaagaaaaat
gttaatttgaaaccaactgcaacagcatatctacagatatttggtactggcagtggcgat
acgaatccgtcaatatttctatttgcagattctcaaagatatgtcttcagttgtggtgag
tcgacgcagcgtctttttaatgaacacaaacttaaacttggaaaaatcaacaatatattc
cttactcaattaaaatggccattttttggtggagtgcctgggttgcttttgactttacgt
gaagccaacaaggcgagtgtgaatttgcatggacctcagggaacgacagacctactgcgt
gcaagcaaaggctttttgtcaatgggtaatttggatctaaggattacggagtatgtttgc
aatggtgacaaagggatatataaagatgagaatatagtagtgaaggccattccaatcaaa
ggtaatcgtgaagaaaattttattgaagaaaattttcactgttattgtgattcaatttgt
gaaccaaaaaagaatttttcgtatggctcagaaataacaaaattactccaatgtgatgat
atgcttgaaagagcaaagcgattgaagtggatatccactcgaggactgtggtcaattatg
tgtgaacttgtgtccatgcgggtaaaatgaatttaaaaagctactgacttgaatgttccc
aaaggaccacttcttggtagattacagaaaggagaagatgttgttttgggtaatggcact
aaggtcagatcttcggatgtaatggagaagtcttcagctggtccaatattctgtatcatc
gactgtcccagtatgtactatctaaaacagttggtgtccaatgacgtccttctgtcatgt
cagttgtacaaagataatttgacaccgatcatcatgattcatctcacccctgaggatgtt
gtgaaagaaccagaatataaagcatggctggaaagattcggtccagaatgtcaacatttg
tttttaaatgaagtaatgtgtcctgcaaaaatatccatgttatctcaacttggtatccaa
tattgtctgaatcaactaaatcctcggttatttccacctttatttgcaacagagaagtca
aatcacgatgatctccctgccaactggagtgttggtgagccatatcttatataccattta
cgacctactactatacaaggctatgatcgtattgagatcagtagaaaatgggatatgctt
acgagtaaagtaacggagagaatgaaatgtttaaaatcctctgaggaattcacgttgctt
caaatgagaaacgctctaaatcaatttataaatcctgagaagtttgtggaaatagcgaaa
gaaaaaatcaaaactgcgaatgaaaagagacatatatcgaaggaatcaaatgaaatggac
aaggaactttctgtcgtctttttgggaactggcgcctcactcccgtcaaaatttagaaat
gttagctgtatgcttgttcatttgagcgatgagcagtcgatacttttggactgcggtgaa
ggcagttatggacagttatatagacattatggtccgaacttacataaagttctactccaa
ctatgctgcatatttatatctcatatgcacgctgatcatcatttgggtctcatcagcgtc
ttacaagcctggaagcggtgtattgattcttgcccgcgcgaagaaagaccagagcccatt
gttgttatagctccgtcatttctttatgattggttacattactacggaactttctgcgat
accttaaacttcaggttttacgattcgcgaaagttcgttgctggcgtacaaacggaggcc
gacaatatcctttcgtctttgttgcatgcaaaggtctccatagttcccgtcgtacattgc
cctcatgcttttggcttggtgttaagccacacgaagggttggaaactagtttactctggg
gacaccagaccgtgtgaggctctgatcaaagaaggattggacgctactcttgtcattcac
gaagctacattggaagacgacttatataacgaagctgttgccaagcaacacagtacaacg
tctgaagccattgaatgtggacagaagatgaaggcaaaattcacgttgttgacacatttc
agtcaacgctaccccaagatccccatttttaatacaaaatttaatgactgcgttggcatt
gcttttgatcacatgatggtgaactttgacaatcttagcgatttgccacagctacttcga
cccctgaaagccattttcaaagaggaatttgatgaacaaagtaaaaactcaagatttatc
aacagtcttcaagtaaatatttattga
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