Xenia sp. Carnegie-2017 (soft corals): 124449416
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Entry
124449416 CDS
T08024
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Pathway
xen04140
Autophagy - animal
xen04142
Lysosome biogenesis
xen04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
124449416
04140 Autophagy - animal
124449416
04148 Efferocytosis
124449416
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xen04131
]
124449416
Membrane trafficking [BR:
xen04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
124449416
Hops complex
124449416
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_PEP5_VPS11
PEP5_VPS11_N
VPS11_N
VPS11_C
zf-C3HC4_2
Beta-prop_EML_2
Beta-prop_WDR3_1st
zf-C3H2C3
Beta-prop_WDR36-Utp21_1st
zf-RING_2
zf_RING_Vps8_fungal
Beta-prop_EML
zf-rbx1
zf-RING_5
Beta-prop_VPS8
Beta-prop_NOL10_N
zf-C3HC4
zf-RING_Vps41
Beta-prop_IFT122_1st
Beta-prop_pof12
zf-Nse
Beta-prop_RIG_2nd
PUA_3
zf-RING_16
TPR_11
Motif
Other DBs
NCBI-GeneID:
124449416
NCBI-ProteinID:
XP_046856298
LinkDB
All DBs
Position
Unknown
AA seq
932 aa
AA seq
DB search
MAMLQWRRFNFFEKDVAKNVETKQPWNLLKDVNIVATTSGRGQLIAGDIEGNIYFLDRNL
NITSIKAFEIRVSHLCQLRQYNILVSIGEDEVGINPLIKVWNLDKTDKLGNPLCMRITRA
LPGNKPVAVTCLSVYENLTQMAVGFEDGSVVVYKGDVTKDRHSKSHVIHQDNLPITSLSY
KQVKSHIILFVTTVDSVISYNTSAKDQREVLDMHGCNPRCSVLSDMSQESQFVFVVARKE
ALYFYQPDCRGAVLPFEGEKSLISWHRGYLVVVSNDMRTIPGQSSTRPMSLVTIYDIQNK
FIAFSGPLPSVFDVLSEWGCLYVLTSDNTIYQFQEKDTQTKLEILFKKNLYAVAIDLARS
LQYSDGLIAIFTQYGDHLYSKGDHDGAIKQYIKTIGYLEPSYVIRKFLDAQRIHNLTAYL
QALHEKNLANADHTTLLLNCYTKLKDVSKLDEFIMTDKEFNFDVETAIKVCRQAAYFNHA
LYLAEKYEHNDWYLKIQLEDTKKYQKALNYIGKLNFQDAKDNLKKYGKTLMEAEPDKTTE
LLKLLCTDYRSSESPLLKDEELAGNTRRVERAEPETFIHIFVHKKNKLIEFLEHMTRVRK
KSSTMVCMTLLELYLNKAKHCKTKMDQVEPEAKALSLLQNFEGKYEIDNDHAMVLSQMHN
FKAGILLLYEKSKLFHQILRYHMEHDEHVNVMETCRKYGSQDSNLWVQALSYFASKENDC
RKYIMEVLNYIDRHNLLPPLLVLQTLAHSSTATLSVVKDYIIKRLQQEDEQIAEDERLIR
QYREETEKMRNQIKELKTSAIIFQSAKCSLCSRPLELPVIHFFCQHSFHTACFEGYAEKD
DECPICAPENRKVLDIIRAQEEMKDLHDQFHNQLERANDGFSVVADYFGRGVFNKVTIVT
DQTSKKQKGVSALDEQTQRNLLMSKSSGNPFL
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgttgcagtggcgacgtttcaatttcttcgagaaagacgtcgctaaaaatgtt
gaaacaaaacaaccttggaatttattgaaggacgtaaatatagttgcaacaacaagtggc
cgtgggcagcttattgctggagatatcgaaggaaatatatactttctggatcgtaattta
aacatcacaagtatcaaagcatttgaaattcgagtgtcgcacctatgccaacttaggcaa
tacaatatacttgtctctattggggaagatgaagttggcattaatcctctaatcaaagtt
tggaatttagataagacagacaagttaggaaatcctttatgcatgagaatcacaagagct
cttcctgggaacaagcctgtggcagtgacatgtttgtctgtgtatgaaaatcttactcaa
atggctgtgggttttgaagatgggagtgttgttgtatacaaaggtgatgttacaaaagat
agacatagtaaatcacatgtcattcatcaagacaaccttcctataacaagtctgtcatac
aagcaagtgaaaagccatatcatattgtttgtcactacagttgactcagttatctcatac
aacacttcggcaaaagatcaaagagaagttttagacatgcatggttgtaatccacgatgt
tcagttttatcagatatgtctcaagagagtcaatttgtttttgttgttgcaaggaaagag
gctttgtacttttatcaaccggactgtcgaggagctgtgttgccatttgaaggtgaaaaa
tcgttgatttcttggcatcgtggttatttggtcgttgtcagcaatgatatgagaacaata
cctggacaaagttctacacgtcccatgagtttggtcacaatatacgacattcaaaacaaa
tttattgcattttctggtcctcttcccagtgtctttgatgttttaagcgaatggggatgt
ctttatgtccttacatcagacaacactatttatcagtttcaagaaaaagacacgcagaca
aagttggaaatcctattcaaaaaaaatctttacgctgttgctatcgatttagctcgaagt
cttcagtattcagatggtttgattgctatctttacccaatatggagaccatttatatagt
aagggcgaccatgatggtgcaataaaacagtatataaagactattggatatcttgaaccg
tcttacgtcattagaaagtttttagacgctcagcgaattcacaacctcactgcgtatctt
caggctctgcacgaaaaaaatctcgcaaatgctgatcacacaacccttctactcaattgt
tacacaaaactcaaagatgtgtccaagttggacgagttcattatgactgacaaagaattt
aatttcgatgtggaaacagctattaaagtttgtcgacaagcagcatattttaatcatgcg
ttgtatctggcggaaaagtatgaacacaacgactggtatctcaagatacagttggaggat
acgaagaaatatcagaaagcactgaactatataggaaaactgaattttcaagacgcaaaa
gataatttaaagaaatatggtaaaacactgatggaagctgaaccagataaaacaacggag
ttattgaagttgctttgtactgactatcgatcaagtgaaagtccccttctaaaagatgaa
gagttggcaggaaatacgagaagagttgaacgggctgagccggaaaccttcattcacatt
tttgtccataaaaagaacaaacttattgagtttctggagcacatgacgagggtacgcaaa
aaatcatcgaccatggtatgcatgactttgttggagctttacttaaacaaagcaaaacat
tgtaaaacgaaaatggatcaagttgaaccggaggcaaaagctctaagcctgttgcaaaat
ttcgagggaaagtacgaaattgataacgaccacgctatggttctttctcaaatgcataac
ttcaaagctggaattctactcctctacgaaaaatcaaagttgttccatcaaatcctacgt
tatcatatggagcacgatgaacatgttaatgttatggagacatgtcgaaaatatggttcg
caagactcgaatttatgggttcaagctctgtcttatttcgccagtaaagagaacgactgt
cgaaaatatataatggaagtgttaaattacattgatcgtcataatttactgccaccttta
cttgtgcttcagactcttgctcatagttccactgcaacactttcagttgttaaggattat
atcatcaaacgtcttcaacaagaagacgaacaaatagcagaggacgaaaggctcatacgt
caatatagagaagaaacagaaaaaatgcgaaatcagattaaagaattaaaaacaagtgcc
ataatatttcaatctgcaaaatgcagtctatgttccagacctcttgagttacctgtaatc
catttcttttgtcaacactcttttcatactgcttgtttcgaaggctacgctgaaaaagat
gatgaatgcccaatatgtgctccagaaaatagaaaagtccttgatataattcgtgctcaa
gaagaaatgaaagatcttcatgatcagttccacaatcagcttgaaagagcaaatgatgga
ttttcagttgttgctgattattttggtcgtggtgtatttaacaaggtgacaatcgtgacg
gatcaaacaagtaaaaagcagaaaggagtttcagcactggatgaacaaacccaacgcaac
ttgttgatgtcaaagtcgtctggaaatccttttctctaa
DBGET
integrated database retrieval system
