Xenia sp. Carnegie-2017 (soft corals): 124449586
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Entry
124449586 CDS
T08024
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6-like isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xen01002
]
124449586
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xen04121
]
124449586
Enzymes [BR:
xen01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
124449586
Peptidases and inhibitors [BR:
xen01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
124449586
Ubiquitin system [BR:
xen04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
124449586
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
DUF7310
Motif
Other DBs
NCBI-GeneID:
124449586
NCBI-ProteinID:
XP_046856477
LinkDB
All DBs
Position
Unknown
AA seq
1208 aa
AA seq
DB search
MMSALGISVDSKELWKSSDLIEKKLGSVLDRKVASSTKQVLLDRIKFKEASNPDPFYQEL
KKKYTPLNRSSTKLQNNGPLLKNHSTSNVKPELNNTKFEKDELPPPKFMLFEKNKVQLQW
KTVRNVGPGLYNLGNTCFLNSVIQVLTYTPPLVNYLATQEHTSQCVKVGFCMLCELQRHV
LRTFSHQQSEAIKPLAILHKLKFIAKHLRFGQQEDSHEFLRYVVDGMTKSCLVGISDKLD
LYTKSTTVVHQIFGGYYRSQVTCERCQHTSNKFDPLMEVLLDIKNVYSVYNALQKLISVE
LLNGDNMYLCPRCKLKVPAKKRIQIHEPPNVLTMCLKRFDCHSLFASKINKDISYPETLN
LRPFLSIKQGCAINFKLFAVLVHAGYSCNSGHYYCFVKAANGSWYQMNDASVRQVSLKTV
LGQQAYLLFYIKDEVTKQKNGSSIPSSIKSPQVNGHHGNKSKTLNSKQFFPKIISEPTVK
THPLAKPFANATSKTTTSACVSFLPRPTSIPKERDKIAFTLNQNSLVKIDHVSPSREEIE
SVSRNFCDDVSEQMQTASQPQQFKESDTNIGIENVGNSTDCKDDQVNDISSSTDGKVEPI
LKKTNKEKDTLVETKESEKNPREIHATTKWIISNHEDLVLGSTAAEVRERTPSLSSEISN
GGSIASKTGEWSVSDRGITQEFGPRLPERQHAGWKVSSSETVGKGDDNEGYRKLATIPLE
KTLRQKHRKKRNFSKNDDEETRLISPMDHEGSREDRKKERLTSDMDREGSREDRKKERLT
SDMDREGSREDRKKERLTSDMDREGSREDRKREKIKRLKKLKRGRDRPSDGEVLSDDIEL
REKRKKDKKNKRKKRKHRKEKLSDEDTKETDEVINTSKDRLLSRNKDDSGYSSSKKDFDK
TKRDSKRSLCENKEKRIKGVGNRVFTKTMKERRNIETDNCGRNDLNPEHFTSNTDTKKED
KFTAKKFINLSQNAIDNARSLVVKGRDFLGKVSECRNRNGSDKIRLVQYSDDSSNESENV
VLNGSANDRVTSVNDRVTSVNDRVTSVNDRVTSVNDRVTSVNDRVTSANDRVTSVNGKCE
SSGNNGRKDNLRSYDERKNIVDVLLENSKVSSNYGGKVERWDGQKEDNAVKEDRTKRRRD
FWDEEYDKGKQMKRRKNSNKTSSYSSRGRNSFQKEYDRRRMKSNGCHSSSSNGWYKRGFE
RHSWRDRR
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcggcgcttggcatatcagttgactccaaagagttgtggaaaagctcggattta
attgaaaagaaactaggctctgtcctagatcgcaaagttgcttcgtcaacgaaacaggtt
ttattggacaggatcaaattcaaagaagcgtcaaatccagatccgttttatcaagagttg
aagaagaagtatacacctttgaatagatcatcaacgaagcttcaaaataacggtccttta
ttaaaaaatcactccactagcaatgtgaaacctgaattgaacaacacaaaatttgagaaa
gatgagcttccaccgccgaagtttatgttatttgaaaagaataaagtccaattacaatgg
aagactgttcgcaatgttggtccaggattgtacaatcttggaaatacctgttttttaaac
tccgtcatacaagttttaacatacacaccgccattagtaaattatctggcgacgcaagaa
cacacaagtcaatgtgttaaagttggattttgcatgttgtgtgaactgcagcgacatgtt
ttaagaacgttttcacaccaacaaagtgaagccattaaacctttggcaatcctacacaaa
ttaaaattcatagccaagcatctaagatttggtcaacaagaagactctcatgaatttctt
cgttatgttgttgatggcatgacgaagagttgtttggttggaatatctgacaagttagat
ctttatacaaaatccacaacagtcgtgcatcaaatatttggtggatactatcgaagtcaa
gtgacatgtgaaagatgtcagcatacatcaaataagtttgatcctttgatggaagtacta
ttggatattaagaatgtttattcggtgtacaacgctcttcagaaattgatctctgttgaa
ttacttaacggtgataatatgtatctatgtccaagatgtaagctcaaagttccagcaaaa
aagcgcattcaaattcatgaaccaccaaatgtgctgacaatgtgtttgaagagatttgat
tgtcattctctgtttgcgtcaaagatcaacaaagatatcagttatcctgaaacattaaat
ctaagaccatttctaagtataaagcaaggctgtgcaatcaacttcaagttgtttgctgta
cttgttcatgctggatattcttgtaactctggacattattattgttttgtgaaagccgcc
aatggatcatggtatcaaatgaacgatgcttctgttcggcaagtgagtttaaagactgtc
ttgggtcagcaagcatatcttctgttttatataaaggatgaagtgacaaaacagaaaaat
ggttcttcgatcccgtcatcaatcaaaagtccacaagtcaatggtcaccatggtaacaaa
tccaaaacattgaactcgaaacagttttttccaaaaattatcagtgaaccaactgtgaag
acacatcctttggcaaaaccatttgcaaatgctacgtcgaaaactacaacgagtgcatgt
gtctcatttttaccacggccaacaagtattccgaaagaacgagacaaaatcgcgtttaca
ttgaatcagaattcgttggtgaaaattgatcacgtttcaccttcccgggaggaaattgaa
tctgtttcgaggaatttttgtgatgacgtttcagagcagatgcaaacggcatcacaacca
caacagttcaaggaaagtgacacgaacattggtattgaaaatgttggaaattctacggat
tgtaaagatgatcaagtgaacgacattagcagttccactgatggcaaagttgagccaatt
ttgaagaagacgaacaaagaaaaagacacattagttgagactaaagaatctgagaaaaat
ccaagagagattcacgccactacaaaatggattatttcaaaccacgaagacctcgttctt
ggatcgacagctgctgaagtaagggaaagaacgccatctttgtcttccgaaatcagtaat
ggcggaagtattgcaagtaaaactggagaatggtccgttagtgatcgtggaattacccaa
gaattcggtcccaggcttcctgagagacaacatgctggatggaaagtgtcctcgagcgaa
actgtaggaaaaggagatgataacgagggctacaggaaattagccacgatacctctagaa
aaaactttacgtcaaaaacatcgaaagaaacgaaatttttcgaaaaacgatgatgaggaa
acaagactgatttcaccaatggatcacgaggggtcaagggaggatagaaagaaggaaaga
ctcacttcagatatggatcgtgaagggtcaagggaggataggaaaaaggaaagacttact
tcagatatggatcgtgaggggtcaagggaggataggaaaaaggaaagacttacttcagat
atggatcgtgaggggtcaagggaggatagaaaaagggaaaagataaagagattgaaaaaa
ctgaaacgaggcagagacagaccgagcgacggggaagtcttgagcgatgacattgaattg
cgggaaaaaaggaaaaaagacaagaaaaacaaaagaaaaaaacggaaacacagaaaggag
aaattgtccgatgaagatacgaaagaaacggatgaagtcatcaatacaagcaaagatagg
ttgttgtcgcgtaataaagacgattccggatattcgagctcaaagaaagattttgataaa
acgaaaagggattcaaaacgatctctttgcgagaataaagagaaaagaattaaaggcgtc
ggaaatagagtttttacaaagacgatgaaagaaagaaggaacattgaaacagataattgt
ggtagaaatgatctgaatcctgaacatttcacatcaaatactgacacgaagaaagaggat
aagtttacggcaaaaaagttcattaacttgagtcaaaatgctatagacaatgcacgaagt
ttagtcgtcaaaggtagagatttcctaggaaaggtttctgaatgtagaaatcgaaatgga
agtgacaagataaggttggtgcagtattctgacgattcttccaacgaatctgaaaacgtt
gtactcaatggatctgcgaatgatcgtgttacatctgtgaatgatcgtgttacatctgtg
aatgatcgtgttacatctgtgaatgatcgtgttacatctgtgaatgatcgtgttacatct
gtgaatgatcgtgttacatctgcgaatgatcgtgttacatctgtgaatggtaaatgtgaa
tcatcagggaataatggaagaaaagacaacttgagaagttatgatgaacgaaagaatatc
gtggacgttttgttggagaattcaaaagtatcgtcgaactacggtggcaaagttgaaaga
tgggatggacagaaggaggataacgccgttaaagaagataggacaaagaggagacgagat
ttctgggatgaggaatacgacaaaggaaagcaaatgaagcgaagaaaaaattcaaacaaa
accagcagttactcttcacgcggaaggaattcgtttcaaaaggaatacgatcgcagaaga
atgaaaagtaacggttgccattcgtcttcttcaaatggttggtataagagaggttttgaa
agacattcatggcgtgatcgtagatga
DBGET
integrated database retrieval system
