Xenia sp. Carnegie-2017 (soft corals): 124450340
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Entry
124450340 CDS
T08024
Name
(RefSeq) mRNA export factor-like
KO
K14298
mRNA export factor
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Pathway
xen03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124450340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xen03019
]
124450340
03036 Chromosome and associated proteins [BR:
xen03036
]
124450340
Messenger RNA biogenesis [BR:
xen03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124450340
Chromosome and associated proteins [BR:
xen03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
124450340
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_CAF1B_HIR1
WD40_RFWD3
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
Beta-prop_Nup120_160
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Rrn6_beta-prop
Motif
Other DBs
NCBI-GeneID:
124450340
NCBI-ProteinID:
XP_046856956
LinkDB
All DBs
Position
Unknown
AA seq
369 aa
AA seq
DB search
MNLGMFGSAFGSTSSSIGGKMPLSLGLGTMQNPMKDVEVPSPPDDSVSRIRFSPKASFFV
ASSWANDIRCWEVTSNASVPKAQQTHQMPILDCCWHDDGSKVFTASVDKTCKMWDLGSNQ
CNVVAQHDQPIKTVNFVQAPSYSCIVTGSWDKTLKFWDMRQSTPVATFKLPERCYCADIV
YPMAVVGTAQRGIIVYSLESQPRQFKKIDSPLNYQHRCVTIFKDKNQQPTGFALGSVEGR
VAIHYINPTTPKDNFTFKCHRSTTSSANNVQDIYAVNDISFHPQFGTFATVGSDGKFSFW
DKDARTKLKTSDPAASLPISTCSFDSTGSIFAYSTGYDWSKGHEYFNPSVKPMILLRSCM
EELRPKGKK
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaggaatgtttggctcagcatttggtagcacttcaagctcgataggtggtaaa
atgcctttatcactgggtcttggtacaatgcaaaacccaatgaaagatgtcgaagttccc
tcccccccggacgacagcgtgagtagaattaggttcagtccaaaagctagttttttcgtg
gcatcatcctgggcgaatgatattcgatgttgggaagtaaccagcaatgctagtgtacca
aaggcacaacagactcatcaaatgccaatcttggactgttgttggcatgatgatggcagc
aaagtttttacagcaagtgtggataaaacatgcaagatgtgggatttaggtagcaatcaa
tgtaatgtagttgcacagcatgatcagccaataaaaacagttaattttgtccaagcacca
agctattcgtgcatagtaacaggaagttgggacaaaactttaaagttttgggatatgaga
cagtcaacacctgttgccacatttaaactacccgaaagatgctattgtgctgacatagtt
tatccaatggccgtcgttggtacagcccagagaggaatcatagtgtattcattggaaagt
caacctaggcaatttaagaaaatcgactctccccttaactatcagcaccgatgtgtgaca
atcttcaaagacaaaaaccaacagcctacaggatttgccttggggtcggtcgaaggacga
gtggccattcattacatcaatccaacaacaccaaaagataattttactttcaaatgccat
cgaagcaccacttcaagcgcaaacaacgtacaagatatttatgcagtcaatgatatttca
tttcatcctcaatttggaactttcgcgacagtcggctccgatggaaaattcagcttctgg
gacaaggacgcacgaacgaagctgaagacgtccgatcctgcggccagcttacccatatca
acgtgttccttcgactcaactgggtctattttcgcttattctaccggctacgattggtcg
aagggacatgaatacttcaatccgtcagtgaaaccgatgattttactgcgcagttgcatg
gaagagctgagacccaaaggaaagaagtaa
DBGET
integrated database retrieval system