Xenia sp. Carnegie-2017 (soft corals): 124450419
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Entry
124450419 CDS
T08024
Name
(RefSeq) nuclear pore complex protein Nup85-like
KO
K14304
nuclear pore complex protein Nup85
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Pathway
xen03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124450419
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xen03019
]
124450419
03036 Chromosome and associated proteins [BR:
xen03036
]
124450419
Messenger RNA biogenesis [BR:
xen03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124450419
Chromosome and associated proteins [BR:
xen03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
124450419
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleopor_Nup85
DUF8073_C
Motif
Other DBs
NCBI-GeneID:
124450419
NCBI-ProteinID:
XP_046857031
LinkDB
All DBs
Position
Unknown
AA seq
664 aa
AA seq
DB search
MEELDIVSRPTFIPLVGNVYASWGGENSIWAFAGQPKLEYERLNASPSSNTIYQMRMDAD
LQNKTTRRLINETYAIFLDLQQLDKAPSQTKNASLVTFSRRYRAVLRACLLGFKQDDPNA
MTDNDEYDQIQLLSFIELVWHLCEILLIEKLPGGVVLQHLLDWVKWHCHTADNVTREVAE
SANPSECHNYWRAIYYLLFQGRIKEARELLSQHHDRNPDGQDEFAIVDDLLKKMPSFKSF
VGHSEFAMKWNYWRQECQSKCSFGDLASYPQLQLIAQILCGDNKAFVEVKGICEDLSWYE
LMVAKLLYSNPNIKSYELQYHTKFCIDLCGGKNSLQLWHMILLAAIEFDVHAVIKISSEC
FGNWWFVAHIVDLFHHCNQLDNHQTQGVYQVDLREFLLLEYASSLMSHESLWQVASEYFL
SCPTSGRHYLEEYIERIPIETETKAFKVLHLCQKNDFSKQALGICREMAMTAYHNHRLGS
ALSWAIKAKDPAFASFIAERFMDDYFDKGEFPSLDLIDNLGSSMLLCDKLTFLGKYREFH
IMYGNGDFSDAAGLLVSLLTSQLAPKRIWLSLLTDALPLLEHDQIVFTTSQTHELMRCLE
ELRLSFRSADYLGNTQSTINDEMEKGSLESSWSDKISEQDKLGLFQPIRLALARNLARSL
LVDD
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggaagaattagacattgtcagtcggccaacctttataccacttgttggaaatgtttac
gcctcttggggaggtgaaaattctatttgggcctttgctggacagcctaaattggaatat
gaacgtttaaatgcatctccatcttcaaacacaatctaccaaatgagaatggacgctgac
ttgcaaaacaaaacaacaagaagattaatcaacgagacttatgctatatttctggacttg
caacaacttgacaaagctccttcacaaacaaaaaatgcaagcctggtaacattcagccgc
agatatcgagcagtcttgagagcttgcttacttggatttaaacaagatgatccaaatgcc
atgacagacaatgatgaatatgaccagatacaactgctaagttttattgaactggtctgg
catctatgtgaaatcttgttgattgaaaaattaccaggcggtgttgtattgcaacattta
cttgattgggtaaaatggcactgtcatacggctgacaacgtcacgagggaagttgctgaa
tcagcaaacccatcagaatgtcacaattattggcgggccatttattatttactgtttcaa
ggacgcataaaagaagcaagagaattgttatcacaacatcacgacagaaatccagatgga
caagatgaatttgcgatagtggatgatctcttaaagaaaatgccatcgtttaagtcattc
gttggccattctgagtttgcgatgaagtggaactattggaggcaggaatgccagagtaaa
tgttcttttggtgatttggcgtcttatccacaattacaattgattgcacagattctttgc
ggagataacaaggcatttgttgaagtaaaaggcatttgtgaggatctatcttggtatgaa
ttgatggttgcaaagctcctgtactctaaccctaacatcaaatcgtacgagctacaatat
catacaaagttttgtatcgatctttgtggaggaaagaattcacttcaactgtggcacatg
attctcttagcagcaatcgagtttgatgttcatgctgtcatcaagataagcagcgaatgt
tttggtaattggtggttcgttgctcatatcgtggatttatttcaccactgtaatcaactg
gataaccatcaaacacaaggtgtgtatcaagttgacttgagggaatttcttctcttggaa
tatgcgtcaagtctgatgtcgcacgaaagtctttggcaagttgcttcggaatactttcta
agctgtccaaccagtggaaggcattacttggaagagtacatcgagagaataccaatagag
acggaaacaaaagctttcaaagttttacatctttgtcaaaaaaatgacttttcaaaacaa
gctttaggcatatgcagagaaatggccatgactgcatatcataatcacagattaggatca
gctttatcatgggcgattaaagccaaggatccagcattcgcttcctttattgcagaaagg
tttatggacgattatttcgacaaaggagaatttccaagtttagatctcatcgataattta
ggatcgtcaatgcttctttgcgacaaattaacctttctcgggaaatatcgtgaatttcat
ataatgtatggcaacggagatttcagtgatgctgccggccttttggtgtctttattaacc
tcacaacttgctccaaaacgaatttggttgtctttgttgacagacgccttgccccttttg
gagcatgaccagatcgttttcacaacttctcaaacccacgagctgatgcggtgtttggaa
gagctcagactatcctttaggtcagcggactatcttggaaatacacagtcgacaattaat
gacgagatggagaaaggtagcttggagtcgtcatggagtgacaagatttcagagcaagat
aaattaggtctatttcaaccgattcgcctcgctctggcaagaaatcttgctcgctctctt
ttggtggatgactga
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