Xenia sp. Carnegie-2017 (soft corals): 124450439
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Entry
124450439 CDS
T08024
Name
(RefSeq) receptor-type tyrosine-protein phosphatase delta-like isoform X1
KO
K06778
receptor-type tyrosine-protein phosphatase S [EC:
3.1.3.48
]
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xen01009
]
124450439
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xen04515
]
124450439
Enzymes [BR:
xen01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
124450439
Protein phosphatases and associated proteins [BR:
xen01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
124450439
Cell adhesion molecules [BR:
xen04515
]
Immunoglobulin superfamily
Type II RPTP family
124450439
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Y_phosphatase
fn3
F5_F8_type_C
Tc-R-P
SUEL_Lectin
PTP-SAK
DSPc
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
SRCR
TMEM154
PTPlike_phytase
Y_phosphatase3
Interfer-bind
PTP-NADK
F5_F8_type_C_2
PRIMA1
EphA2_TM
GBD_ELAPOR1-like_3rd
CATSPERB_head
Glycophorin_A
DUF4813
FeoB_associated
Motif
Other DBs
NCBI-GeneID:
124450439
NCBI-ProteinID:
XP_046857064
LinkDB
All DBs
Position
Unknown
AA seq
1582 aa
AA seq
DB search
MMTKISQFLYTLFVGVVLLLSLKETNGFFIKHVQSGKCIYDTGVEYSRYPSINPIHLTYY
LNLTKNCFDSTTQFKFHQSGSILKPNRRGCLVGDRILQDLFLIYEKKGDIAAACNDANAL
TQTFQGGIFTSDFDKCAVPPGYIKRHVYMGIANCNNEEDQRFHFGAVTCAGQKIADASCS
NNQYMVIKVAEYRGLRNGSSCGLSYDYSCSVDVTCDLKNYCDGERKCDVSVDDYHFSSSI
CPGLDKYLYFEYQCNDTSTPHREICNFENVHLSQSILPNKGVVDVITKFRNFTICNNGLL
AEVKTTVCNRFGYPSALNIESWTSILTSVNHFFTPGNVACGAQVNDLSQCSITQNNSCSQ
YLYVTCHICKRPLLNNKHSFPNTSFSALSSTINHSAKEARISSGSSWCAPAANGTHYLEL
KFQKLYAINTIVIFGDSVSPCWVSSFYLNATSDLINWESVFHQNSQKVFPGNKNAYSDAA
ISNITGGIRTRALRIIPLSYTGQPCLRTEVCGGELHPNSPTNLHVNSTASRYVTISWVDP
QNVAVSPSTGLKNPLTKFKFILRKKTMAIFNFVEQANVSRPYKLSNLIPNTMYTVEVFAG
NSEGFGDPANASFHTNEDVPDGPPLNVTVAVVNSSSLSITWKPPDISKRNGKIINYTICI
TRWKNGTCSRNFTTTNQSFIVNDLKPATTYYISVLASTIIGRGNYSENEIAITNELQPEK
PTNFTEETLTFSLKSPVQKYEFLYVIAMEGDEKNPPPPSNFSNVDLIRHSTRSQPKLYIA
AVLKVSGDGMFVFILGDGLNSSISKPRTRRSTDRDYNNRPLRPDTTYRIFQRVVVNNMGV
YYSTDWSPAAKTDPRPTTAPTTSAPQTPSPSTSAPQTPSLTTNPTLRLSSTTKKDEGNET
LIFIAAAAAAGIVLIIIFVIVAVCLRRGRKGNKKSKSSLSSNDEGEKGYELSIKNEAFVG
EDIVDAVQPQVENNRDLSNPIPDDDDTYANNETIIVRNHFPVPLEKFHEHVKKLRQKNMQ
ELKLEFEDLPNGQKCNWDIAKNSINSAKNRYGNAVTYDHSRVILSGDEKSDYINASFVDG
KCEKYYIATQGPKPKTVDDFWRMIFEHKCSTIVMLTTLKEMGKVKCEKYWPDESNEYGEI
KVTVTKTKTFADYVTRMMVVEKDGEQHKVEQFHYKSWPDYGVPRYPTQLLTFIKHFKLSH
RTRFGPVVVHCSAGVGRTGVFIAIDKILDDLDDDYETNIDVFGFVEEMRSRRINMVQTAD
QYMFIHDTIVDHIQCGANEVDAVEIKVEISQLSKTNGAGKTGFEEKFERLQSVTSELPEE
LCEAALSDENKKKNRNPNIYPTETNRPTLRRIERVESSDYINACFVDGYLGKNYFIATQM
PLNETINDFWRMVTQHECTTIVLLSLINEDEEEYPMFWPTKRATSQPYGTCTVLFDSVVK
NEDIVVRKFIASPTRDIKEGRMVRMVQYLSWPNHGVPKDVKSLVNVLTEVEEAQRAVEVK
GPVVVVCSDGAGRSGTYITISNLVDRVKIVQVMDVFQCIKLIRSRRPQFVETAEQFKFCY
NAVSCVLESFDEYSNFTEIAKS
NT seq
4749 nt
NT seq
+upstream
nt +downstream
nt
atgatgacaaaaatcagtcagtttttgtacacgctatttgtcggagttgttttgctcctt
tctttaaaagaaacaaatggattttttattaaacatgttcaatcaggaaagtgtatttat
gatactggggtagagtattcaagatatcctagtatcaacccaattcaccttacttattat
ctgaacctaactaagaactgttttgactcaacaactcagtttaaatttcatcaatctggc
tccatattaaaaccgaatagaagaggttgccttgtgggagacagaatcttacaagatttg
tttttgatatacgaaaagaaaggtgacattgctgctgcatgcaatgacgccaacgcttta
acccaaacttttcaaggtggaatatttacttccgactttgataaatgtgcagtacctcca
ggatatattaaacgtcatgtctacatgggaatagctaactgtaataatgaagaagatcag
cgatttcattttggtgcagtgacatgtgctggacaaaagatagcggacgctagttgctcg
aataatcaatatatggtgataaaagttgcagaatatcgtggattgagaaacggaagctct
tgtggtttaagttatgattacagttgtagtgtcgatgtaacatgtgaccttaaaaattac
tgtgatggggaaagaaaatgtgatgtatctgttgatgattatcatttctcttcaagtatt
tgccctggtttggacaagtatctttactttgaatatcaatgtaacgacacaagtacgcca
cacagagaaatttgtaactttgagaatgtacatctgtctcagtcaattttgccaaacaaa
ggtgtcgtggatgttattacaaagtttagaaacttcaccatctgcaacaatggtcttttg
gctgaagtaaaaaccactgtctgtaatcgatttggttatcctagtgcactgaatatagaa
agctggacgtcaatactaacatcagttaatcatttttttacacctggaaatgttgcatgt
ggtgctcaagtgaatgatttatcccaatgttcaataactcaaaacaatagttgttctcaa
tacttgtatgtgacatgtcatatatgtaaaaggcctttattaaacaacaaacatagtttt
ccaaacacctccttttctgccttgtcctcaactattaaccattctgccaaagaggcaaga
atttccagcggtagttcttggtgtgctcctgctgcaaatggcactcattatcttgaactg
aaatttcaaaaactttatgcaatcaacactatcgtcatctttggtgatagtgtaagccca
tgttgggtatctagcttttacctaaacgctacatctgatttaataaactgggaatcagtt
tttcaccaaaattcacaaaaggtttttccaggcaacaaaaatgcttacagtgacgctgct
atctcaaacatcacaggtggtattagaacgagagctttacggattattcctttgagttac
actggtcaaccatgtttacgaactgaagtttgtggtggagaattgcatccaaacagcccg
accaatctccatgtcaattcaaccgcttcaagatacgttacaatatcctgggtagaccca
caaaacgttgcagtatctcccagtacaggcctcaaaaatcctctgaccaaatttaagttt
attttgaggaaaaaaacaatggcgatctttaactttgttgagcaagccaatgttagtaga
ccttacaaattgagcaatcttattcctaacacaatgtacacagttgaagtattcgctgga
aactcggaaggttttggagatccagcaaatgcttcttttcacacaaatgaagatgttcct
gatggtcctcctttaaatgtaacagtcgctgttgttaatagttcatcgttatcaatcacg
tggaagccacctgatataagcaagagaaatgggaaaattatcaattacacaatttgtatt
acacgatggaagaatgggacgtgttcaagaaactttactacgacaaaccaaagttttatt
gtaaatgacttgaaaccagcaacaacgtactacatcagtgttttggccagtactataatt
ggtcgaggaaattacagtgaaaatgaaattgcaataacaaatgaattgcagccagaaaag
cctacaaattttacggaagaaacgttgacgttttctttaaagagtcctgttcaaaaatat
gaatttctctatgttattgcgatggaaggagatgaaaaaaatccccctccaccttctaac
ttcagcaatgtagacttaataaggcattccacgcgctcacaaccaaagctttacattgct
gccgtgcttaaagtcagcggtgatggcatgttcgtgtttatacttggtgatggcttaaat
tcaagtatttcaaaaccacgaacacgacgatctacagatagagattataataatcgtcct
ctaaggcccgatactacttatcgaattttccagcgagttgttgtgaataatatgggtgtt
tattattcaactgattggagtcctgctgcaaaaactgatcctcgtccaactactgctcct
acaacttctgctcctcaaactccttctccttcaacttctgctcctcaaactccttctctg
actacaaatccaactctacgtttgtcttcaactacaaaaaaggatgaaggcaatgagact
cttatttttattgctgccgctgctgccgctggtattgtattgataatcatttttgttatc
gtggcagtttgcttaagaagaggacgaaaggggaataaaaaatctaagtctagtctgtcc
tctaacgatgagggagagaagggatatgaactttccataaaaaacgaagcgtttgttggt
gaagacatcgtggatgctgtgcaaccacaagtggaaaacaatagggatcttagcaaccca
attcctgacgacgacgacacatatgcaaacaatgaaaccattatcgtccgaaatcatttt
ccagtacctcttgaaaaatttcatgaacacgtaaagaaactaagacaaaaaaacatgcag
gaattaaagcttgaattcgaggatttaccaaatggtcagaaatgcaactgggatattgca
aaaaatagtataaactctgccaaaaacagatatggaaacgcagtcacatacgaccattct
cgtgtgatactctctggtgatgaaaaatctgactatatcaacgcttcttttgtcgacgga
aaatgtgagaagtactacattgcgacccaaggaccaaaacctaaaacagttgatgatttc
tggaggatgatctttgagcacaagtgttcaaccattgttatgttgacaactttgaaagaa
atgggaaaggtaaaatgtgaaaagtattggccagatgaatctaacgaatacggtgaaatt
aaagtgaccgtcaccaagacaaagacctttgctgattacgtcacacgcatgatggtggtt
gaaaaggatggcgaacagcacaaagtcgagcagtttcactacaaatcatggccagactat
ggagtgccccgttatccgacacaactgttgactttcataaagcattttaagctatcgcac
aggacaagattcggtccagtggtcgtacattgtagcgccggtgttggtcgtactggagta
tttattgccatagataaaatcctcgatgatctagatgatgattatgaaacaaacattgat
gtatttggctttgtggaagagatgagatcgcggcgcataaacatggttcagacagcggat
caatacatgttcattcatgacaccattgtcgatcacatccaatgtggagcgaatgaagtt
gatgctgtagaaataaaggtcgaaatatcacaactgtcaaagacgaatggggctggaaaa
acaggatttgaagaaaaattcgagcgtttacaatcagttacatcagagctcccagaagaa
ctttgtgaagcagcactttcggatgagaacaagaagaaaaatcgtaatccaaatatctat
ccaacggaaactaatcgtccaactcttcgacgtattgaacgtgtggaaagttctgactac
ataaacgcatgttttgttgatggttatctaggaaagaattactttattgcaacacaaatg
cctttaaacgaaacaataaacgacttttggaggatggtaactcagcatgaatgcacgacc
atcgttttgctgagtctgataaatgaagacgaggaggaatatccaatgttttggcccacg
aagagagcaacaagtcaaccatatggaacatgtactgttttgtttgattctgtcgtaaag
aatgaagacattgttgtgagaaagtttatcgcttctccaacgagagacatcaaagaaggt
cgaatggtcaggatggttcagtacttatcatggcctaatcatggagtacctaaagatgta
aagagtttggtgaatgtcttgacagaagtcgaagaggcacaaagagctgtggaggttaaa
ggacctgttgtcgttgtctgcagtgatggagcaggtagatcaggtacctatatcaccatt
tcaaaccttgtggatcgagttaaaatcgtccaagtcatggatgtgtttcagtgcataaaa
ctgatccgaagtagacgcccacaatttgtcgagacagcggagcaattcaaattttgttac
aatgcagtgtcatgcgtgttggagtcctttgacgagtattcaaatttcacagaaatagcg
aaatcttga
DBGET
integrated database retrieval system
