Xenia sp. Carnegie-2017 (soft corals): 124450569
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Entry
124450569 CDS
T08024
Name
(RefSeq) protein shortage in chiasmata 1 ortholog-like
KO
K28108
shortage in chiasmata 1
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xen03036
]
124450569
Chromosome and associated proteins [BR:
xen03036
]
Eukaryotic type
Meiosis-specific proteins
Others
124450569
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SHOC1_ATPase
SHOC1_PDDEXK
SHOC1_HhH_tandem
DUF7102
SHOC1_2HhH
Motif
Other DBs
NCBI-GeneID:
124450569
NCBI-ProteinID:
XP_046857192
LinkDB
All DBs
Position
Unknown
AA seq
886 aa
AA seq
DB search
MSNFIVELNDGYEKILWKDVYDSRIDGSSLAVDLTKGMKSHEEEVKKNIFSEVHSNISSS
LSTKEKEKQGKHHGILSSLHCNNRKRKGFHSGIDDFILLRTGVRSTSSSPPKAVVKAITL
DQQDAKISKSFLQEKGNTIEDITDVIDIHLNNELQAKYIYVENCIESCLVHLKQTGCLAS
SYSAGNINGDYTRFLLKQEEKKNLDRSDTRVNHSYMMLIVLHTLVTTAESIRECGLSVAL
ANFQAMWSFYKKELNGFLDEIMANLMIIDESLKNAKKYHPKVVATYNYIVSWQPNPSSLT
LDEKILIILFRGFHHLSTIIVRSLEDIKGLKIATITKNNSQVMVNDAHVFICDPTDVPYH
FSWSSFKWFITFTQNKTKELENLLQGVHLKGKKIICFRGVTSGDININPHGIDAQQYFNE
DLQNQEIYTLIGSSKITKNAVLLRCLEQKCGIVIIEREYDIILKNTNSTSSKLCRQPDLI
LDQRTAVIIENIRNFACEDGYKDIVDLVLSTSFKCEVCSIILLCDPDNFKYSFVGEVQSN
LAKFHGCLLSIQLSFENFVIDIHYSQSIKDAAALIRELCDTARDSSHFINKRDWINREWL
ADECSQNERFLLGFPSLNSFSAQMMLNVLPLSALLSSSFVTLKEALPRIPEDTLKKFRET
TECGLNVDENEEDYTIQIPRFPIDEDEEMEVKHDFRSGAFNSIVNMDKEHQMSQSAFALN
TQLSYERDQRLTSFPRDSFTNRYRSMRNFADNNVHQCQKQHESNLSQRINFEIEDNRGES
MDRSRFLRRISKKRGFETRDVVGVVQPKPRETIRFRNTNSGVCQPSYHHVTSHPDNIWCE
NDRDQEKNVKEVFLHSLTGKPAEKKKKLTYETVPGAKNGQTRLTFV
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgtctaactttattgttgagttgaatgatggatatgaaaaaattctatggaaagatgtt
tatgactctaggatcgatgggtcgtcattagctgtagacttgacaaaggggatgaagtca
catgaagaagaggttaaaaagaacatcttttctgaagtacactcaaacatttcatcttca
ttatcgactaaagaaaaggaaaaacaaggaaaacatcacggaatcttgtcgtcgctccat
tgtaacaacagaaaacggaaaggttttcattcaggaatagatgatttcatattgctcaga
actggcgttagatcaacttcaagttctcctccaaaggctgttgtgaaagccattacgctt
gatcagcaggatgcaaaaatatccaaatcctttttacaagaaaaggggaatactatcgaa
gatataaccgatgtgatagacatccatctgaacaatgaactgcaagctaaatacatttac
gttgaaaactgcattgaaagttgtctcgtacatttaaaacaaactggttgtttggcatcc
tcatactcagctggtaacataaatggagattatacaaggttcttgttgaaacaagaagag
aagaaaaacctagatcgatcagacactcgtgttaatcattcttatatgatgcttattgtt
ttgcatacgttggtcactactgcggaatcgatccgagaatgtgggctttctgtcgcttta
gcaaattttcaagctatgtggagtttctataaaaaagaactaaacggtttcttggatgaa
atcatggccaatcttatgataatcgatgaaagcttgaaaaatgccaaaaaataccaccca
aaggtggttgcaacttacaattatatcgtgtcatggcaaccgaatccttcctcgctcacg
ttagatgagaaaatattgataattttatttcgcggttttcatcatctatccacaatcatt
gtacgctcactcgaggacataaaaggcctaaagattgcaaccattacaaaaaacaactct
caagttatggtgaatgacgctcatgttttcatttgtgatcctactgacgtaccgtatcat
ttttcttggtcgtctttcaaatggttcattacttttactcaaaataaaacgaaagagtta
gaaaatctcctgcaaggagttcatcttaaaggcaaaaagatcatttgctttagaggagtt
acatctggtgacatcaatattaatcctcacggcattgatgctcagcaatattttaatgaa
gatcttcaaaaccaagagatttatacacttattggatcttctaagataacaaagaacgcc
gttttattgagatgtttggaacaaaaatgtggaatagtgattatcgagagagaatatgac
attatcttgaagaatactaattccacctcatcaaaattgtgtcgacaaccagatcttatt
ttggaccaacgtactgctgtgatcattgaaaacattcgtaattttgcctgtgaagacggg
tataaggatattgtcgacttggttctttcaacttctttcaaatgcgaagtttgcagcatt
attctactttgtgatcctgacaattttaaatactcgtttgtgggagaagtacagtcaaat
ttggcaaaatttcacggttgcttattgtcaatacaactttcatttgagaattttgtgatc
gacatccactattctcagtcaattaaggacgcagctgctttgatcagagaactgtgtgac
acagcaagagattcttctcatttcataaataaacgagattggattaaccgtgagtggtta
gcagacgaatgttcgcaaaatgaaagatttcttcttggttttccatctttaaactccttt
agtgctcaaatgatgttgaatgttcttcctttatctgcacttttgagttcatcttttgtt
acgttaaaggaagctctcccaagaatacctgaagacactttaaagaaattcagagagacg
accgaatgtggtttgaatgttgatgaaaatgaagaagattacacaattcagatacctaga
tttcctatcgatgaagatgaagaaatggaagtgaaacatgattttagatcaggcgctttt
aacagcattgtaaacatggataaagaacatcaaatgtcacaatctgcctttgctttaaac
acacaattgtcatatgagagagatcaacgtctaacatctttcccacgtgactctttcact
aaccgctacagatctatgcgaaattttgcagacaacaacgtgcatcagtgtcaaaagcaa
cacgaaagcaacttatctcaacgcattaattttgaaattgaagacaatagaggcgaaagc
atggacagatcaagattccttcgaagaatttcaaagaaacgaggttttgaaacgcgtgat
gtcgttggagtagttcagcccaagccaagagaaacaattagattcaggaatacaaattca
ggtgtatgtcaaccgtcatatcatcacgtgacgagtcatccagacaatatttggtgtgaa
aatgatcgcgatcaagagaaaaacgtgaaagaagtttttctgcactcattgaccggaaaa
cccgcggaaaagaaaaagaaactcacctatgaaactgttcctggagctaagaatgggcag
acaagattgacttttgtttga
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