Xenia sp. Carnegie-2017 (soft corals): 124450814
Help
Entry
124450814 CDS
T08024
Name
(RefSeq) paired amphipathic helix protein Sin3b-like isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Pathway
xen04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
124450814
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xen03036
]
124450814
Chromosome and associated proteins [BR:
xen03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
124450814
REST complex
124450814
Heterochromatin formation proteins
Other heterochromatin formation proteins
124450814
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
HHD_RTEL1
CRF-BP_N
DUF5600
Motif
Other DBs
NCBI-GeneID:
124450814
NCBI-ProteinID:
XP_046857433
LinkDB
All DBs
Position
Unknown
AA seq
1275 aa
AA seq
DB search
MKRTREEHEKVFGQHRFQQQILAPAPVGHSNNFEALQENIAVSMGQFPSNQQIPHQTYPV
TGPTGQGQGHSPLPSHPQAHMHPSGAAGHMQGPGGPGQQQFQRLKVEDALSYLDQVKMQF
GNQPQVYNDFLDIMKEFKSQSIDTPGVISRVSNLFKGHPELIVGFNTFLPPGYKIEVHPN
DANSISYTTPHQNALQKTALSGQSVHTINLTGNHSGHSVSHNISSFGHHGPSPSPQQQQQ
QTSSQQPPTSQHLAQSQHQQQLATLSQHAAQQPKHQINNLSQPPAHSQSHQGQQHQRQLH
SPPSNQTQPQQPVEFNHAISYVNKIKTRFQGQPDTYKAFLEILHTYQKEQKNIKDGTQFS
EQEMYVREAKLANDVYKQVAKLFKNQEDLLQEFSQFLPDANGAPISGLSALSKRAHNQMS
NASGSYGGPPNKKQALSSTSVKRNLGQMRRSSTSSQSKVKSRSNGMKDNLPDPSSFGSVA
EFAFFDKVRKALRSQKVYEDFLRCLKLFNQEVISRADLVQLVSAFLGKFPDLFTWFKEFL
GYKDSSPMDTPSFKERTSGELAHLEIDYASCKRCGTSYRALPKTYTQPKCTGRTALCREV
LNDTWVSFPSWSEDTTFLGTKKTQYEEYIFRCEDERFELDGIIEVNLSTIRVLEAVQKKL
GHMTSEEQQKFRLDGCLGGTSEVIHKKAIYRIYGDKASDIIDGLKKTPAVAVPLVLKRLK
AKEEEWRAAQRLYNKIWREQNEKYYLKSLDYQGATFKQNDLKGMRSKSLLTEIENIYDEK
QEQAAEGNADPTGPHMVFTYKDKSILDDAAGLIVHHMKRQTGIHKEDKSKIKSLLYTFVP
DLFFAPRGELSDDEDSVKDSNGCGRSDASNGLPEAESDDAYNLMFVNNNWYIFLRLHQMV
CERLLKMFQRSVEIAEGEASDKKQRKESTAVALRLKAPTDVDVEEYYPVFLDMVRNLLDG
NMESSSFEDTCREMFGVHAYIVFTIDKLVTNIVRQLQTIVVDDTCVQVMDLYQQEQSREG
AGGNSATQGLRKEEEISYQKKAEALLNDENCYKFIVHKDKTIITISIELIVTEDVHYDDM
MAFEKWTDYVDKFVSNQEIPKVVKERLKVKPVFLPRTSRHIRSKKAPEGEKSAVDGEELG
NSPSNIEGEETSADIVNEDTMECKISSNTYKLKFVRGGRSYFYRRRSLPKARKVYPTITR
KLSENFQRWLEAWVMENVSRDQKSTCDQWLAGKVDGLRPCNTIKQTVRNNFKSYTKYNVE
WPTPAVPLSDSSTQS
NT seq
3828 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaactcgagaagagcacgagaaagtatttggtcaacacagatttcagcagcag
atcttggcaccagctccagttggccatagcaacaattttgaggcactacaagagaacatt
gcagtatctatggggcagtttccatcgaaccaacagataccccatcaaacttaccctgtg
actggacccactggacaaggtcaaggccacagccctttgccttcacatccgcaggctcac
atgcatccatcaggtgccgcagggcacatgcagggtccaggaggacctgggcagcagcaa
tttcaaagacttaaggttgaagatgctctttcgtatttggaccaagttaaaatgcaattt
ggcaatcaaccacaggtctataatgactttctggatataatgaaagaattcaagtcgcaa
agcattgacacgcctggtgtgataagtcgcgtttccaacttgttcaaaggacatcctgag
ctcattgtaggattcaatacgtttcttccacctggatataaaattgaagtgcatccgaac
gatgctaactctatttcttatacaacgccacatcaaaacgctttgcagaagaccgcttta
agtgggcaatctgttcacacgatcaatttaacgggaaatcacagtggtcacagtgtctca
cacaacatttcctccttcggtcatcacggtccctcgccatcccctcaacaacagcaacaa
cagacttcgtcccaacaacctcccacgtcacagcatctcgcgcaatcgcaacatcagcaa
cagcttgccaccctctcgcaacacgctgcccaacagccaaaacatcagatcaacaacctc
agccaaccgccggctcactcgcagtctcatcaaggtcagcagcatcagagacaactccac
tcaccaccgtccaatcaaacccaacctcaacaacccgtcgaattcaaccatgcaattagt
tacgtgaacaaaattaagacacgtttccaagggcaacccgacacatacaaggcattcctc
gaaatacttcacacttatcagaaggagcaaaaaaatatcaaggacggaactcagttctcc
gaacaagagatgtacgtacgtgaggcgaagcttgccaacgatgtgtacaaacaggttgca
aagctgtttaagaatcaagaagatttacttcaggaattcagtcaatttcttcccgatgcg
aacggtgctccaatctcgggattgagtgctttgtccaaaagagctcacaatcagatgtca
aacgcgtctggctcgtacggaggacctcccaataagaaacaagcattgagctcaacttcg
gtgaagagaaacttaggtcaaatgcgaagatcctcgacatcaagtcaaagcaaggtgaaa
tcgcggtcaaacgggatgaaagacaatcttccggatccaagtagctttggctctgttgct
gagtttgcatttttcgacaaggtacgcaaagctctgcgaagtcaaaaggtttacgaagat
tttctacgttgtctcaaactttttaatcaagaagtcatctcgcgcgcagatcttgttcaa
ctcgtttctgccttcctggggaaatttcccgatctcttcacgtggtttaaggaattcttg
ggttacaaggattccagtccgatggatacaccaagcttcaaggaaagaacctctggcgag
cttgcccatcttgaaatagattacgcgtcttgcaagcgatgtggcacaagctatcgtgct
ctacccaagacctacacacaaccaaaatgcaccggccgcacggctctatgtcgcgaggtc
ctcaacgacacgtgggtctccttcccaagttggtcggaggatacaacatttcttggaacg
aagaaaactcagtacgaggaatacatattccgttgtgaggacgaacgattcgaattggat
ggaattatcgaagtgaatttgtccacgatccgcgtcctcgaggcagtgcaaaagaaattg
ggtcacatgacctccgaagagcaacagaagttccgattggatggctgtcttggcggtact
tctgaggtcatacacaagaaggctatctataggatatacggtgataaagcttctgatatc
attgatggtttaaagaagactcccgctgttgccgtaccgcttgttttgaaacgactaaaa
gcgaaggaagaggagtggcgtgctgcacagcgattatacaacaaaatttggcgagaacaa
aatgaaaagtattatcttaagtctttggattatcaaggagcaactttcaagcaaaatgac
ctgaaggggatgcggtcaaagagtttgttaaccgaaatcgaaaatatttatgacgagaaa
caagagcaagctgcagaaggaaatgctgatccaaccggacctcacatggtctttacttac
aaggataaatcaattcttgatgacgccgcaggacttatcgtccatcacatgaaacgacag
actggcatacacaaggaagacaagtcaaagatcaaatccttgctgtacacatttgtaccc
gatctcttttttgcgccaagaggagaattaagcgacgacgaggattctgtgaaagacagc
aacggctgcgggaggtccgatgcatcgaatggattaccagaagccgaatctgatgatgct
tacaatctgatgttcgtcaacaataattggtacatctttttaagacttcaccagatggtc
tgtgaacgcttactaaagatgtttcaacgttctgtcgagattgccgaaggcgaagcatcc
gataagaaacagagaaaggagtcgaccgctgtcgcgttgagactgaaggctcccacagat
gtcgatgtggaagagtattatcccgtgtttctcgatatggtgcgaaatttacttgatgga
aacatggaatcaagcagttttgaagatacatgtcgtgaaatgttcggcgttcatgcgtac
attgttttcaccattgacaagcttgtaacgaatattgttcgtcagcttcaaaccatcgtt
gttgacgacacgtgtgtccaagtaatggatctgtatcagcaggaacagtctcgcgaagga
gctggagggaactctgctactcaaggcctccgaaaggaagaggagatttcctatcagaaa
aaagcggaagcgttgctcaatgatgaaaattgttataagtttattgtgcacaaagataag
acgattataacgatcagtattgaacttattgtcactgaggatgttcattatgacgatatg
atggcattcgagaaatggaccgactacgttgataagtttgtatcaaaccaagaaatcccg
aaagtggtgaaagaacgactgaaagtgaagccggtctttttgcccagaacttcaagacat
attcgctcaaagaaagcgccagaaggtgaaaaatctgccgttgatggcgaagagctcggt
aacagtccaagtaacattgaaggcgaggaaacgtccgctgacatcgtgaacgaggatacg
atggaatgcaaaatctcttcgaatacatacaaactcaagttcgttcgtggtggccgcagt
tatttctatcgtagaagatcgctgccaaaagctagaaaggtatatccaacaatcactcgt
aagttgtcggaaaatttccaacgttggctggaagcttgggtgatggaaaatgtttcacgt
gaccagaaaagtacgtgcgatcagtggttggcgggaaaagtcgacggcttgcgaccttgc
aacacaatcaaacagacggtgcgaaacaatttcaagagttatacaaagtataacgtcgag
tggccaacgcccgcggtacctctgtccgattcaagtactcaatcataa
DBGET
integrated database retrieval system
