Xenia sp. Carnegie-2017 (soft corals): 124450919
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Entry
124450919 CDS
T08024
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1-like
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xen04040
]
124450919
Ion channels [BR:
xen04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
124450919
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Ion_trans
PKD_channel
Cep57_MT_bd
Motif
Other DBs
NCBI-GeneID:
124450919
NCBI-ProteinID:
XP_046857525
LinkDB
All DBs
Position
Unknown
AA seq
1160 aa
AA seq
DB search
MQSNEDTNVAPGHEMHVINNATEKDRLLPHHAEIEHEEVLKVPSDRIQFYESIPRKPPLR
RSRSVDRTDNESIRAVPEEDEREPSALSLEPCETEKFTGPAQSYPDFALSSCFNFNRSQN
LDKMCNDLFLSIHYHEVDKLKEILEEDPQVLAKLFTRRDNNGLPCIMKAIARQSLGCIRL
LLDEFEKLDFKKFGIDQMDALQSDGKRNALHIAAQVVRGKEIIEAIAVDSIMKLLADCED
NQETTPLIVACEYQNHAFVVRLIKYGAKIDHVNKKGYSPLYWAAVNGSAMTLKILLEQGV
RSRDLSLLELFKNCKIYNGMETIIEAILLSKDPETLKVCLSVQEGEEIIKQCLKQLERKP
TFIHSICETPLIKLVELAVEDNLQLLKRQDENGTTPLIRAIEANQNEVAKRLLEIEVNGT
MSQKEKPTYETALIHACKLQNYDIIIKIMEISDNDLSIVDADERNIFHHAAKHDEVLSII
IGYCRVDLKKCENYKRHLTQADKNGHVPLHYAASSGAWKNVKLLLENGVPHDSRSFHLER
TPLHYAAFSNIETVRALVDHVANLQQDVSKFVNAVDSNLQTCLHLAACLGKWQTVSYLLE
HGATITGDKERETPVHMAAMSGCIRTIECLIRNDRTAIDAENLVGETPVMFAAAEGNKQA
LNFLLENEASLWGSSHCDSVEKRKTCLDWAVLAENSDIAKSILERKNWREAMEKSCYGAD
GLLAKMVELMPHVALEVLKKCEEPSSGGKKYDFFALQTTEGSSGCGKPGQYVTALKSLKA
MVNHSRDQCLSHDVVQRFLHEKWVVGGRKCYMLMFFIYGMFLLALTAYATFTTLGYVSGE
SPSCNASRIVCCIFGVFSLAKGIFQLVHRRLKYFNSVSAYLELAMYICVFIFIPNDKKSN
MQQQAGAIAVFLAWINFTWFLKRFQTYGIYIIMVNKIFITFVKVFVPVSFFLMAFSMAFF
VLFHKEDAGFDNIVKSFVTSFAMMVGEVDYRDTFLQNKGENFALRLVFLVLFLIVVGILL
MNLLTGLAVGDIGMIMKRSFIESQRQQAMLIIDIDHFLGRYPGFKTKYLERLIVTKKKHR
HNFAIKCFQKLVDLMYPRLNIEYDNNTEKNHECNEIAQLKCQLSKVQKTLEEINSSLEKS
KRKNPNTKLKNYYSRRHTLQ
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgcaatccaacgaagataccaatgtcgcaccagggcacgagatgcatgtaataaacaac
gccaccgaaaaagatagattacttccccaccatgctgagatagaacatgaagaggtctta
aaagtcccctctgatcgcatccaattttatgagagcatacctagaaaacctccattaagg
cgtagccgctcagttgaccgaacggataacgaaagcattcgagctgtacccgaagaagat
gagagggaaccgtctgctttatccctcgaaccatgtgaaactgaaaagttcactgggcca
gcgcagagttatcccgattttgctctttcaagttgtttcaactttaacagatctcaaaac
cttgataaaatgtgcaacgatctcttcttgagcattcactatcatgaagttgacaagttg
aaggagatattggaagaagatccgcaggtactagcaaaactttttacccggcgcgacaac
aatggtttaccttgtatcatgaaggcaatcgctcgacaaagtttggggtgtattcgactg
ctgttggatgagtttgagaaactcgatttcaagaaatttggcattgaccaaatggatgcg
cttcaatcggacggaaaacggaatgccttacatatcgcagctcaggttgttcgaggcaaa
gaaattatagaggcaatcgctgtggattccataatgaaactgcttgccgattgcgaagac
aaccaagagacaacaccactaattgttgcctgcgaataccagaatcatgctttcgttgtt
cgtttaatcaagtatggggcgaagattgatcacgtgaataaaaaaggatattctccgttg
tattgggctgctgtcaacggaagtgcgatgactttgaagattcttcttgaacaaggtgtt
aggagtagggatttaagcctgttggagcttttcaaaaactgcaagatctacaatggcatg
gaaacaatcatcgaggcaattttgttgagcaaagatcctgagacattaaaagtttgttta
agcgtccaagaaggtgaagaaatcatcaagcaatgtttgaaacaattggagagaaaacca
acttttattcatagtatttgcgaaacgccgctgatcaaattagttgagcttgcggttgaa
gataatctacaattgttgaaaagacaagacgagaacggtactaccccattaataagagca
attgaagcaaaccaaaacgaagttgcaaaaagattattggaaatagaggttaatggaaca
atgtcgcagaaggaaaagcctacttacgaaacggcattgattcatgcttgcaagctgcag
aattatgacattataataaaaatcatggaaatttctgacaacgatctttcaattgtcgat
gccgatgaaagaaacatatttcatcatgctgcaaaacacgatgaagtgttatcgatcatc
attggttattgtagagtggatctgaaaaagtgtgaaaattacaagaggcacctgacgcaa
gctgataaaaatggacacgtgccactgcattatgcagcatccagtggagcatggaagaac
gtgaaactgcttcttgaaaatggtgtacctcatgattcccgtagtttccatttggaacga
acgcctttacattatgcagcatttagtaacattgaaaccgtacgggccctcgtagatcat
gttgcaaatcttcaacaagatgtttcgaaattcgtaaatgcagttgattccaaccttcag
acgtgcttacacctcgcggcctgtctcggtaaatggcaaactgtttcatatctgctagaa
cacggtgccaccatcacaggcgataaggagcgtgagacacctgtgcacatggctgccatg
tctggttgcatcagaaccattgaatgtctaatcaggaacgataggacagcgattgacgct
gagaatcttgttggtgagactcctgttatgtttgctgccgccgagggaaataaacaagcg
ctgaattttctgttggagaatgaagcgagtctttgggggagcagtcattgtgatagtgta
gaaaagcgaaaaacatgtttagattgggctgttcttgctgaaaattctgacattgcaaag
agtattttggagcgtaagaactggagagaggccatggaaaaatcctgctacggagccgat
ggattgctagcaaaaatggtggagttgatgccgcatgttgctcttgaggtgttgaaaaag
tgcgaggaaccgtcaagtggtggcaagaaatatgacttttttgctttgcagactactgaa
ggatcgtcaggatgcggaaaacccggtcaatatgttactgctctgaaatcattaaaggca
atggtgaatcattcaagagaccaatgtttaagccatgacgtcgtgcaacgctttcttcat
gaaaaatgggtagtcggtggacgaaagtgctatatgttaatgttcttcatctacgggatg
tttctcctcgcacttacggcctatgctacttttactaccttgggttacgtaagcggggaa
agtccatcatgcaacgcctcacgtatcgtatgctgtattttcggtgtcttcagcctcgcc
aaaggaatttttcagctcgtgcatcgaagactgaaatactttaacagtgtgtcggcgtat
ttggaattggccatgtacatttgtgtgtttatatttataccaaatgataaaaagagcaat
atgcaacagcaggcaggagcgattgcagttttccttgcgtggataaattttacttggttc
ttgaagcgatttcaaacgtacggcatatacatcattatggtcaacaagatatttatcacg
ttcgttaaggtttttgttcctgtatcattcttccttatggcgttctcaatggctttcttc
gtgcttttccacaaggaagacgccggttttgataacatagtcaagtcttttgtaacatcg
ttcgccatgatggttggcgaggtcgactatcgtgacacatttcttcaaaacaagggcgag
aatttcgcccttcgtctcgtcttcttggtattatttctcattgtcgttggcattctactc
atgaatttgcttacaggtctcgctgtcggcgatataggaatgattatgaagcgttcattt
atagaaagccaacgccaacaggcaatgctaattattgacattgatcattttttgggaaga
tatcctggttttaagacgaaatatctggagcgtttgatcgtaacaaagaaaaagcatcgt
cataattttgccatcaaatgtttccaaaaactcgtggacttgatgtatccacgtttgaat
atcgaatatgacaataacacggagaagaaccacgaatgtaacgaaatagctcagttaaag
tgccagttgagtaaagttcagaaaactctagaggaaatcaacagctcgttggaaaaaagc
aagagaaaaaatccgaacacaaaattgaaaaactactattctcgtcgacacactctacaa
tag
DBGET
integrated database retrieval system
