Xenia sp. Carnegie-2017 (soft corals): 124450931
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Entry
124450931 CDS
T08024
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB11-a-like
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Pathway
xen03020
RNA polymerase
xen03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
124450931
09124 Replication and repair
03420 Nucleotide excision repair
124450931
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xen03021
]
124450931
03400 DNA repair and recombination proteins [BR:
xen03400
]
124450931
Transcription machinery [BR:
xen03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
124450931
DNA repair and recombination proteins [BR:
xen03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
124450931
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
SHNi-TPR
Motif
Other DBs
NCBI-GeneID:
124450931
NCBI-ProteinID:
XP_046857541
LinkDB
All DBs
Position
Unknown
AA seq
117 aa
AA seq
DB search
MNAPATFETFLLLDGEKKITITKDTKVPNAAHFMVNKEDHTLGNLLRAQLLKDPQVLFAG
YKVPHPLESKFILRVQTTSDSSPQEAFTNAITDLISEVSLLEERFKAAIREKKEGID
NT seq
354 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcaccagcaactttcgaaacgtttttgttgctcgatggagaaaagaaaataacc
attaccaaagacactaaagtacctaatgctgctcattttatggtaaataaagaagatcac
acacttgggaatttactaagggcgcaattattgaaagatcctcaagtgttgtttgctggg
tataaagtacctcatccccttgaatccaagttcattcttcgtgttcaaacgacatcagat
tccagtccacaggaagcattcactaatgctatcacagatttgattagcgaagtttcgttg
ttggaagaacgtttcaaagcagcaattcgagagaagaaggaaggaattgattga
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integrated database retrieval system
