Xenia sp. Carnegie-2017 (soft corals): 124451685
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Entry
124451685 CDS
T08024
Name
(RefSeq) LOW QUALITY PROTEIN: HBS1-like protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Pathway
xen03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124451685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xen03019
]
124451685
Messenger RNA biogenesis [BR:
xen03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
124451685
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
UBA_4
PHC2_SAM_assoc
Motif
Other DBs
NCBI-GeneID:
124451685
NCBI-ProteinID:
XP_046858246
LinkDB
All DBs
Position
Unknown
AA seq
656 aa
AA seq
DB search
MSRHRNVRNYAYEEEMYDDVYGHSVEEHDLCVSPTTAQQFLYRRGESRQADLSSFMEESL
DYDDVDYGDNPDYLEDQRDYEVAKLNKEDEVKLLSCLDEFRSILGDHCDENEAKSAIIKH
NFDLERAIDDVLNNENQVLRSPTVSRSDKDSRHQNSPTKKEKYRMENASLKVNTPSPTVS
TKNSTEASRCTSAVEEARIPSPVSPSSTKSAKVNSQKEKEVAEREKKVRQGKTLLNLVVI
GHVDAGKSTLMGHVLYLLGDVSKKTMHKYEQDAKKAGKASFAYAWVLDETGEERERGITM
DVGLTRIETDSKIITLMDAPGHKDFIPNMISGAAQADVAVLVVASSTGEFEAGFEAGGQT
REHAILIRSLGVTQLLVAVNKLDTVGWSQERYNTIITKLXEILKQVGFKESDVNYVPCSG
LTGENLVKPAQEKSLISWYKGPSIIQGIDSFNVPERPLDKPFRLCVSDVFKGTGSGVNIM
GRAECGQVKMXSKVMVMPAAVQGQAKSISVHGEPGEWAQAGDHVTLTVHGVDIVNITVGS
ILCDPSNPIQSVTKLRARIMVFNIDVPLTRGFPVVFHFQTINEPAIIKRLISVLHKXTGE
IIQKKPRCLTKNSTANIELELSRPVCVELYKDCRNLGRFMLRYGGKTIAAGIVTKI
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagacatagaaatgtgagaaattatgcgtacgaagaagagatgtatgatgatgtc
tacggtcactcagtcgaagaacatgatttatgtgtctctccaactactgctcaacagttc
ctgtatcgcaggggggagtcaaggcaagctgatctttcatcatttatggaggaatcattg
gattatgatgatgtggattatggagataatccagattacctagaagatcagagggattat
gaagtagctaaactgaataaagaggatgaagttaaactcctgtcatgtttggatgaattt
cgttcaattcttggagaccattgtgatgaaaatgaagcaaaatcagcaattataaaacac
aactttgatttggaaagagcgatagatgatgtattgaacaatgaaaatcaagtcttgaga
agtcccactgtttcaagaagtgataaagattctaggcatcaaaacagtccaacaaaaaaa
gagaagtatcgaatggagaatgctagtttaaaagtaaacacaccatctcctactgtatcg
acgaaaaattccaccgaagcgagcagatgtacatcggctgttgaggaagcgaggattccg
tcacctgtcagcccttcatcaaccaagtctgcaaaagtaaatagtcaaaaagaaaaagaa
gtagctgaaagagagaaaaaagtacgacaaggaaaaacacttcttaatttagttgtcatt
ggtcacgtagatgcgggaaagagtactttaatgggtcatgtactctacttattaggagac
gtgtctaaaaaaacgatgcacaaatatgaacaagatgcaaagaaagcaggcaaggcgtca
tttgcctacgcatgggtactagatgagactggtgaagaaagagaacgtggtataacaatg
gatgttgggttaactcgtattgaaactgactctaaaataatcacgttaatggatgcacca
ggacataaagatttcattccgaatatgatttctggtgctgcgcaggctgacgttgctgtt
cttgttgttgcctcatcaactggagaatttgaagctggttttgaagcgggtggacagaca
agagaacatgctattttaatacgctctcttggtgttacacagttactagttgctgttaat
aaactagacacggtgggatggtcccaagaacgatacaatacaattatcactaaactanaa
gaaattttaaaacaagttggcttcaaagaaagcgatgttaattatgtaccctgtagtggt
ttgactggtgaaaatttagtcaaacctgctcaagaaaagtctttaataagttggtataaa
ggaccaagtatcattcaaggaatagattccttcaacgtcccagaaagacccttagataaa
ccttttcgcttatgtgtttcagatgttttcaaaggtactggctctggtgttaatatcatg
ggtcgtgctgaatgtggtcaggttaaaatgnngtcaaaagttatggtgatgcctgctgct
gtacaaggtcaagctaaaagtatatctgttcatggagagccgggagaatgggcacaagct
ggtgatcacgtgacgttaactgtacatggcgtggatatcgtgaacataactgtaggcagt
atcctttgtgatccttcaaatcccatacaatctgtgacgaaacttagagcgagaatcatg
gtttttaacattgatgttcccttaacacgaggatttcctgttgtgtttcacttccaaacg
atcaacgaacctgccattatcaaacggttgataagtgtacttcacaaanatactggtgaa
attatacagaagaaaccaagatgtttgacgaagaattcaactgcaaatattgaactggag
ttatctcgaccagtttgtgtagagttgtataaagattgtaggaatcttggtcgttttatg
ctacggtatggtggaaagactattgctgcgggaattgtcacgaagatttga
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