Xenia sp. Carnegie-2017 (soft corals): 124452026
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Entry
124452026 CDS
T08024
Name
(RefSeq) transducin beta-like protein 3
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Pathway
xen03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
124452026
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xen03009
]
124452026
Ribosome biogenesis [BR:
xen03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
124452026
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_THOC3
WD40
WD40_Prp19
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Utp13
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
NBCH_WD40
Beta-prop_SCAP
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_Aladin
Beta-prop_DCAF12
ANAPC4_WD40
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_WDR41
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_VPS8
WD40_like
Beta-prop_IP5PC_F
Beta-prop_SPT8
Beta-prop_NUP159_NUP214
WDR54
Beta-prop_WDR35_TULP_N
Utp12
UTP15_C
Cytochrom_D1
P16-Arc
VID27
Diphthami_syn_2
Motif
Other DBs
NCBI-GeneID:
124452026
NCBI-ProteinID:
XP_046858579
LinkDB
All DBs
Position
Unknown
AA seq
802 aa
AA seq
DB search
MAQLSNVVKLKTNFNVVTKHEAFYTGGKIQFATSQQVIFCTCGEKIQVLSITSGKVTHSL
SEESDDIACFALSPDDKILISCSKNLLFRQWDWRNEKCTRSWKAVCKGPISCMKFDSTST
LLAAGSTDGTVKIWDVDKQYYTHNLKGSQGVISIIFFHEIGEKLHLLTAADDYKIRLWDL
HKSRCVTVFEGHYSVVTSLAFPEEDVLISSSRDNVINIWDVSKRKLRKTVPTFEMIEAVL
MLPSDVTFPDVETQRKYFLTCGHKGILKVWDYTRFKCVFETALQGAASDSSQRENSSIVI
VQAEVCQDIRCISVVTADHNIFLLSYDGIKQQKQFVGYNDEILDMAFMGPSEKEIVVASN
SAQVRLYDLTTMDCQLLSAHSDVVICVDVHMSGELLVTGSKDNTIRIWKKEENGKMKCVG
VGHGHAHVVSCVAWPKIKTSFVVSGSQDFTIKMWSTEVDYTNEEVSKLDVLLTEKAHDKD
INSIAVSPNDKMIATGSQDKTVKIWRRSNFRLLGTLRGHRRGVWSVQFSPIDQCIATGSA
DSMIRLWALSDFTCLKTLEGHSNSVLKILFISRGMQLLSCDSDGLIKLWTIKSSECVKTS
DEHNDKLWCIAVSDSQQVMVSGGVDSVLNVWKDVTEEEESTARMAVEDQLKKEQELSNYL
QRKQFTKALSLALTLEQPYRTLNVIKDILLEEEGNEELTKTLQSLRDDQIDVLIKFLCDW
NTNAKHSRVSQLVLSTILKQHSPTWMMDRPDMKERIEALLPYTERHLERMNRLLQQSMFV
EYTWLSMKLGTTTDSIERNMQE
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atggcacaattatcaaatgttgtgaagctcaaaacgaatttcaatgtggtgaccaagcat
gaagctttttatactggagggaaaattcagtttgcaacctctcagcaagtcattttttgt
acctgtggagaaaaaattcaagtgttgagtatcacaagtggtaaagtcacacattcatta
tcagaggaaagtgatgacatagcctgttttgcattaagccctgatgataagatattgatc
tcttgcagcaagaatcttctttttaggcaatgggattggagaaatgaaaagtgcactaga
tcatggaaggctgtatgcaaaggacccatttcatgcatgaagtttgattcaacttccaca
ttgttggctgcaggctcaactgatgggacagttaaaatttgggatgttgataagcaatat
tatactcacaatttaaaaggctctcagggtgttataagtatcatattcttccatgagatt
ggtgaaaaattacatttactaacagcagcagatgattataaaataagactgtgggatctg
cataaaagcagatgtgtcacagtttttgagggtcattatagtgttgtaacatccttggca
tttcctgaggaagatgttttgattagctcttccagagataatgtcatcaacatttgggat
gtatcaaagagaaaactcagaaagactgttccaacatttgaaatgattgaagctgtgtta
atgcttccttcagatgttacatttcctgatgttgaaactcaacgaaaatactttttaact
tgtggacacaaaggtatattgaaagtgtgggattacacgcgatttaagtgtgtatttgaa
actgctcttcaaggagctgcaagtgatagcagtcaacgagagaacagttctatcgtcatt
gttcaagctgaagtttgccaagatattcgatgtatttctgtcgttacagcagatcataat
atatttttactcagttatgatggcataaagcaacaaaaacaatttgtaggttataacgat
gaaatacttgatatggctttcatgggtccctctgagaaagagattgtcgttgcatctaat
agtgctcaggtccgtctttacgatttaacgacgatggattgtcaactgctatctgctcat
tcagatgttgtgatatgtgtggatgtacatatgtcgggagaactcttggtaacgggttca
aaggacaacacgataagaatatggaagaaagaagaaaatggcaaaatgaaatgtgttggt
gttggacacggacatgcccacgttgttagctgtgttgcatggccgaaaatcaaaacatcg
tttgttgtaagcggcagtcaagattttaccatcaaaatgtggtctactgaagttgattac
acgaatgaagaagttagtaaacttgatgttttacttacagaaaaagcacatgataaagat
attaactccattgctgtgtcaccgaatgataaaatgattgcaacaggttcgcaagataaa
acggttaagatctggcgtcgttctaacttccgattattgggtacattacgtggtcacaga
cgtggtgtatggtctgttcagttctcacctatagatcagtgtatagctacaggttctgct
gactctatgatacgtctttgggctctttctgacttcacgtgcctgaagacattggaagga
cattcaaactctgtgctaaaaattttgtttatttctcgtggaatgcagctgttgtcatgt
gattcggatggtttgattaaactgtggacaataaaatcaagtgaatgtgtcaagacatcg
gatgaacataatgataaattgtggtgcattgctgttagtgattcacagcaagttatggtc
agtggtggtgttgactctgttcttaatgtttggaaggatgtcacagaagaagaggaatcg
actgcaagaatggctgttgaagatcaattaaagaaggaacaagaattgtcaaattacttg
caaagaaagcagtttacgaaagctttaagtctggcgttgactttagagcagccatacaga
acattgaatgtgataaaagatattttgcttgaagaagaaggtaatgaagagcttacgaaa
actttacaaagcttacgggacgatcaaatagatgtcttgataaagtttctctgtgactgg
aatacgaacgctaaacatagtcgtgtatcacaactagttttatcaacaattctcaagcaa
cattcaccgacttggatgatggatcgacctgacatgaaagaaagaattgaagcactgctt
ccttatacagaaagacatttagaaagaatgaaccgattattgcagcaatcgatgtttgtg
gagtatacatggctgtcaatgaagcttggaacgactacagattccattgaaaggaatatg
caggagtga
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integrated database retrieval system