Xenia sp. Carnegie-2017 (soft corals): 124452609
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Entry
124452609 CDS
T08024
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase SIAH1A-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Pathway
xen04120
Ubiquitin mediated proteolysis
xen04137
Mitophagy - animal
xen04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124452609
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
124452609
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
124452609
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xen04121
]
124452609
Enzymes [BR:
xen01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124452609
Ubiquitin system [BR:
xen04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
124452609
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
124452609
NCBI-ProteinID:
XP_046859149
LinkDB
All DBs
Position
Unknown
AA seq
281 aa
AA seq
DB search
MSMNRPSPAASVSRKMIRQNSTASQAVASGNVDLTSIFECPVCFDYVLPPILQCSSGHLV
CSNCRPKLQCCPTCRGPLGSIRNLAMEKVASTIMFPCRYNSAGCSATLPFSEKAEHEESC
EFRPYTCPCPGASCKWQGALDAVMPHLMHTHKSITTLQGEDIVFLATDINLPGAVDWVMM
QSCFGHHFMLVLEKQEKYEGHQQFFAIVQLIGTRKQSENFVYRLELNGNRRRLAWEXTPR
SIHEGISSAIANSDCLIFDTSMAQLFAENGNLGINVTISMC
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgaatcgaccctcacctgccgcctcagttagcagaaaaatgattcgacaaaac
tcgaccgcttctcaagctgtggcaagtggaaacgtggacctaactagtatttttgaatgt
cctgtttgttttgattacgttttaccaccaattctacaatgctctagtggccatcttgta
tgttccaactgccgacccaaactacaatgttgcccaacatgtcgtggtccacttggcagc
attcgcaatttggctatggagaaggtagctagtaccataatgtttccatgtcgatacaat
tctgctggatgtagtgccaccttacctttctcagaaaaagcagagcatgaggaatcatgt
gagtttcgaccatacacttgtccctgtccaggtgcatcatgtaaatggcaaggagctttg
gatgctgttatgccacatttgatgcatacacacaagtcaattacaacccttcaaggtgaa
gatattgtatttctagccactgatataaacttacctggtgctgtagattgggttatgatg
caatcttgttttggacatcacttcatgcttgttctagagaaacaggagaagtatgaagga
catcaacaattttttgctatagtacaacttattggtaccagaaaacaatcagaaaacttt
gtttatcgattggagctcaatggtaaccgtcgtcgtttggcttgggagncaacacctcgt
agcattcatgagggtatatcatcagcaatagccaatagtgattgcttgatatttgataca
agtatggcacagctttttgctgaaaatggcaatttgggaataaatgttaccatctcaatg
tgctag
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