Xenia sp. Carnegie-2017 (soft corals): 124453028 Help Entry 124453028         CDS       T08024                                  Name (RefSeq) 5'-3' exoribonuclease 2-like   KO K12619   5'-3' exoribonuclease 2 [EC:3.1.13.-] Organism xen  Xenia sp. Carnegie-2017 (soft corals) Pathway xen03008   Ribosome biogenesis in eukaryotes xen03018   RNA degradation Brite KEGG Orthology (KO) [BR:xen00001]  09120 Genetic Information Processing   09122 Translation    03008 Ribosome biogenesis in eukaryotes     124453028   09123 Folding, sorting and degradation    03018 RNA degradation     124453028  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:xen03021]     124453028    03019 Messenger RNA biogenesis [BR:xen03019]     124453028    03009 Ribosome biogenesis [BR:xen03009]     124453028    03016 Transfer RNA biogenesis [BR:xen03016]     124453028 Transcription machinery [BR:xen03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      124453028 Messenger RNA biogenesis [BR:xen03019]  Eukaryotic type   mRNA degradation factors    5'-3' decay     5' exonucleases      124453028 Ribosome biogenesis [BR:xen03009]  Eukaryotic type   Pre-60S particles    RNases     124453028 Transfer RNA biogenesis [BR:xen03016]  Eukaryotic type   tRNA degradation factors    Rapid tRNA decay (RTD) pathway factors     124453028 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  XRN_M XRN_N Motif Other DBs NCBI-GeneID:  124453028 NCBI-ProteinID:  XP_046859669 LinkDB All DBs Position Unknown AA seq 1049 aa AA seqDB search MGVPAFFRWLSKKYPSIVVHSYEEKPREVNDVKIPVDSSKANPNNVEFDNLYLDMNGIIH PCCHPENKPAPKNEDEMMVAIFEYIDRIFSIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR ASKESKDKREDLARYREEVLGQGGELPPVKEKTEHFDSNCITPGTEFMDNLSLALRYYIA QRLNYDPGWQNIKVILSDANVPGEGEHKIMDFIRKQRASPSHDPNTHHCLNGADADLIML GLATHEPHFTILREEFKPNQKKPCDLCGQVGHEFKDCVGLPKEKTGEFDEQPLPVAEEVN FIFIRLNVLREYLERELRMEGLPFPYDFERCLDDWVFMCFFVGNDFLPHLPSLEIREGAI DKLINLYKKCLPATGGYLTENGYVNMRGVHKILVDLGEMEDMIFKQRQQRELQFRQREKE KKARSCVDGPRWVPAGQFAPQPISNTLKAIESPRIEAYNMRMEAQNRKNFSAAANLRSML FEDKPKKNDSTVTETVDRSKSNSNPVEKEDDTPVDNVRLWEEGWRERYYLQKFGVSSDDE SYNDFRDQVASAYAEGLCWVLRYYYQGCCSWKWYFPFHYAPFASDFKNVESKRYKFEKGT QPFNPLEQLMSVFPAASGNFLPPTWRDLMSNPESPIIDFYPTDFEIDLNGKKYAWQGVAL LPFVDEKRLLKALAQVYPDLTVEESRRNSRGKDRLFVGPKHSLYDFFKGLYEGGGTNDEV DLVTDLSQGMCGKVMLDDEAILPSKCVESPVPQLRNIPDNLAIGIKFEDIKYGEDYVFKA KLLPKVTMPDRVLKPEDWTDNRPYRPQTGFSRHAPRASLDMSARRMLGFHMKSGGASTSY RETGIDRRNSYPPPAHMTAYGQGRFSAPGPWPRQRPSYYSNTPRGFNPYQREARQSGGSR HHGTTYGSSYHSGQSQNDRFSNKTEVSPYGRNSRYGDRNIPYNSRDSMYNGQGSSYGSRD SSYDARNNSYNGRDNSSSSRDYRYGGRDSSYGDQNGRYGSSVGYAGHSYPNQDDLRRRST GSFKAPSDEQGRRSYKTPQGHTQGRFNPY NT seq 3150 nt NT seq  +upstreamnt  +downstreamnt atgggagttccagctttttttcgttggttatcaaagaaatacccgtctattgttgtgcat tcttatgaagaaaagccacgtgaagtaaatgatgtaaagattcctgttgattcgagcaaa gcaaatccaaacaatgttgagtttgataatctttacttggacatgaatgggattattcat ccttgctgccatccagaaaacaaaccagcaccaaagaatgaagacgagatgatggtagcc atctttgaatacatagataggattttttctattgtccgtccaagaaagttattgtatatg gcaatcgatggagtggcaccaagagccaaaatgaatcaacaaagatctagacgatttcga gcgtcaaaggagtcaaaggacaaacgtgaagatcttgctagatatcgcgaagaagttctt ggccaaggaggtgaacttccgcctgtgaaagagaagacggagcattttgacagcaattgt atcacaccgggaacagaattcatggacaacctatcgctagcattacgttattacatcgct caaaggttgaattatgatcctggttggcagaatatcaaggttattttgtctgatgcaaat gttcctggcgaaggtgaacataaaataatggatttcatacgaaaacaaagagccagtcct agtcacgatccaaacacacatcactgtttaaacggagctgacgctgacttgatcatgctt ggacttgcgactcatgagccacatttcacaatcttgagagaggagtttaaaccaaaccag aaaaagccctgtgatctgtgcgggcaagttggtcacgaattcaaagattgtgttggttta ccgaaggaaaagactggggagtttgacgagcaaccgcttcccgttgctgaagaagtgaat tttatctttatacgtctaaacgttcttcgagagtatcttgaaagagagttgcgaatggaa ggtttaccctttccgtacgattttgagcgatgtttagatgactgggtgttcatgtgtttc ttcgttggcaacgactttttaccgcatcttccttcattggaaataagggaaggagctatc gataaattaatcaatctctacaagaaatgtttaccagcaacgggtggctatcttactgag aacggttacgtcaatatgagaggtgttcataagattctggtcgatcttggcgaaatggaa gacatgatattcaaacaacgacaacaaagagaacttcaatttcgacaacgagagaaagaa aaaaaagcaagaagttgtgtggacggaccacgttgggtacccgctggtcagtttgcacct cagcctatttctaacactctcaaagctattgaaagccctcgtatcgaagcgtataatatg agaatggaggctcagaatcgaaagaattttagcgctgcagcaaatttgcgttcaatgctt tttgaagataaaccgaagaaaaatgattctactgtgacagagacagtagatcgcagtaaa tcgaattcaaatccagttgaaaaagaggacgacacaccagtggataatgtcagattgtgg gaagaaggttggcgcgagagatattatcttcaaaagttcggcgtgtcgtcggatgacgaa tcttacaacgattttcgagatcaagtggcaagtgcttatgctgaaggattgtgttgggtg ttacgatattactatcagggttgctgttcgtggaaatggtatttcccttttcattatgca ccattcgcatcggattttaagaatgtcgagtcaaaacgatataaattcgagaaaggaaca cagccgttcaatcccttagagcaactaatgagtgtttttcctgcagcgagtggtaatttt ctacctccaacatggagggatttgatgagcaatccggaatctcccatcatcgacttctat cccactgactttgagatcgacttgaacggaaagaaatatgcttggcaaggtgtcgcactg ttgccgtttgttgatgaaaaacgtctattgaaagcgctggctcaggtttatccagattta actgtcgaagagtccagacgcaacagtcggggaaaggatagactatttgttggtccaaaa cattccttgtacgacttttttaaaggtctttatgaaggaggaggaacaaatgatgaagtt gatttagtgacagatctctcgcaaggtatgtgtggaaaagtgatgctggacgatgaagct atcctgccgtcaaaatgcgtggagtcacctgttccgcaactcagaaatattcctgataat ttagccatcggtattaaatttgaggacatcaaatatggcgaagattacgttttcaaagca aagcttcttcctaaagtcacgatgcctgaccgtgtgctaaaaccagaagactggacagat aacagaccttaccgacctcaaaccgggttcagtcgtcacgccccaagagcttctttggac atgtcagctcgtcgaatgctgggtttccacatgaagtctggtggagcaagtacgtcatac agggagactggaatcgaccgacggaattcctacccacctcctgcacatatgactgcctac ggtcaaggccgattctcggctccaggtccttggcctcggcagcgaccgtcatactatagc aatacaccaagaggtttcaacccttaccaacgagaagccagacagtctggtggtagtcga catcatggtaccacctatggttcttcgtaccattctggtcagtcacaaaatgatcgtttc tcaaataaaacggaagtcagtccttatggtaggaacagtcgctatggtgatcgcaatata ccgtataatagtcgtgatagcatgtataatggccaaggtagctcgtatggtagtcgagat agctcgtacgatgctcggaataattcgtacaatggtcgtgataattcgtctagtagtcgg gattatcgatatggtggtcgggattcctcatatggtgatcaaaatggtcggtatggctcg tccgtgggttatgcaggacattcctatcctaatcaggatgatcttagaagaaggtcaaca gggagttttaaagcacccagcgacgagcaaggacgaagaagctacaaaacaccgcagggt cacacccaaggtcgtttcaatccttactaa

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