Xenia sp. Carnegie-2017 (soft corals): 124453037
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Entry
124453037 CDS
T08024
Name
(RefSeq) transforming growth factor-beta receptor-associated protein 1-like isoform X1
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Pathway
xen04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
124453037
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xen04131
]
124453037
Membrane trafficking [BR:
xen04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
124453037
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
ERAP1_C
RhoGEF67_u2
TPR_12
Motif
Other DBs
NCBI-GeneID:
124453037
NCBI-ProteinID:
XP_046859684
LinkDB
All DBs
Position
Unknown
AA seq
866 aa
AA seq
DB search
MSFNAFDLVSVIDRVQLMGDKAKTTVQCLDCAAQNLFVGTGDSLIIHYIIADDVSPSGKP
VFEYSLQGYKSLSLKKPVQQLLTAAAINRLLVLCDGVLFLLSIMGLEMIISGYKDKLKGA
TCIARNDNPSSFDPFAVEVCVGTRKKAIYIAMITEDNIYTTREITLNEPPIQMNFNGNTV
CVALSNVYCNIDIPTSKVQELISYEPQNKPIITRITTEEFLLSGPTDILGMFVTSQGTSL
RPPLSWTDGLVALGYSFPYVIAVGRASITVYSILESDKNSIKEVIPFQAGCLTCSVENKV
FICTEKSVFCLVQITFKKQIENLLKTKKVEEAIRLAKVAMQTELGSSRDKHLLSRTQQEA
GLIYLMEGKYTQALELMHQGNVDVRELIAIFSELRCSNSLFKPQIPGIDKIRQLISTDAD
MEKKIKIFVLEYLEESKGSEKVYNLIKEEIDTALLKLYAEENSPILQDLICNENACAYED
SVDCLQKHKRFHCLALLHKSCHYEEKALQLWTRLVDKELEDPNFPGIETIIKCLTSIENE
ELIWRYVPWIMKKDQSLAVRIFCGRSPDDTSKKLQIDYVMEYFSKFPKALQKYLEYLVYD
RKLQNERYHSRLAILYLDEVLTLIRETNASKDDIDKARLAFRSLLKFSSLYNASLLLSKI
SEDSGLDLESAILYGRLEHHEKALKIYVHRLQDYEGAVTYCEFYSKNRETAYRKRLFHQL
LTVYLNTNSSARSNDHVVAAVRLLNSHIRDFEPIKVIEIIPDEWSVRLISPFLLGLSRES
LHASRNSQVQKNLRRAENIKAKKGYIKCTRKPVTITDETYCRVCRRTFNDSNMARYPNNI
ITHVHCAKHKTLCPVTGQMFPMNEDL
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atgagtttcaatgcatttgacttggtttctgttatagatcgtgttcagttgatgggtgat
aaagcaaagacaacggtgcaatgtttggattgtgcagctcaaaatttgtttgttggaact
ggtgacagtttgattattcactacatcatagcagatgatgtctcaccatctgggaaacct
gtgtttgaatatagtttacaaggatacaaatcactatctttgaagaaacccgtacaacaa
ttactcacagcagcagcaataaaccgactgctggtcctttgtgatggtgtcttgttcctg
ctcagtattatgggcttggagatgataatttctggatacaaagacaaactgaaaggcgct
acctgtattgcacgcaatgacaatccttcatcatttgatccattcgcagtagaggtttgc
gttggaacacgaaagaaagcaatctacatagctatgataacagaagacaatatctacaca
acgcgagaaataacgctcaacgaacctccgattcaaatgaattttaacgggaacacagtt
tgcgttgctttatcaaatgtttactgtaacatcgacatacccacaagcaaagtgcaagaa
ctaattagttatgaacctcaaaataaaccaataatcacaagaattaccacggaggaattc
ttgttgagtggaccaacggacatcttaggaatgtttgtgacatcacagggaacctcgtta
aggccaccattgagttggactgatggtcttgttgctcttgggtactcttttccctacgtt
attgctgttggtcgtgcatctatcacagtttatagtattttggaatctgataaaaactcc
ataaaagaagtcataccttttcaggcaggctgtcttacttgtagtgttgaaaataaagtg
ttcatatgtacagaaaagtctgtcttctgtctcgtccagataacttttaaaaaacaaatc
gaaaatttacttaaaacaaaaaaggttgaggaagcaatacgacttgctaaagtagcgatg
cagacagagttgggaagttctagagataaacacttgttatcccgaacacaacaagaagct
ggtttgatatatttaatggagggtaaatacactcaagctttagagttgatgcatcaggga
aacgttgatgtaagagagctgattgcaatattttctgagttgcgttgcagcaattctctc
ttcaaacctcaaatacctggaatagataaaataagacagctaattagtacagacgccgat
atggaaaagaagataaaaattttcgtcttagaatacttagaagaaagtaaaggatctgaa
aaagtttataatcttatcaaagaagaaattgacacggcattgttgaaactttacgcggaa
gaaaattcgcccattttacaagatcttatatgtaacgagaacgcatgcgcgtacgaagat
agtgtagactgtttacagaaacataagcgttttcattgtcttgctttgttgcataaatca
tgccattacgaagaaaaagctcttcaactgtggactagattagtcgataaagaattagaa
gatccgaattttcctggcatagaaacgatcataaaatgtttgacgagtattgaaaacgag
gaattaatttggcgttatgttccatggataatgaaaaaagatcaatctttggcagtcagg
atattttgtggaagaagtcctgatgacacttcaaaaaaactacaaatagactacgtcatg
gaatatttcagcaaatttcctaaggctcttcagaagtaccttgaatatttagtttatgat
agaaaattacagaatgaaaggtatcatagtcgtctagcgatattatacttagatgaagtt
ctaactttaataagggaaacaaacgcttcaaaagatgacatagacaaggcaaggcttgct
ttccgatcattgttgaaattttcttcactttacaatgcttcgctgttgctttcaaaaatt
tctgaagatagtggattggatctagaatcagccattttgtatggcaggctagagcatcat
gaaaaagctttgaaaatttacgttcatcgattacaagactatgaaggtgccgtgacttac
tgtgagttttattccaagaatcgcgaaacggcttatcgaaagagattgtttcatcaactc
cttactgtgtatttgaacacgaacagcagcgcacggagtaatgatcatgttgtggccgct
gttaggttacttaactcacatatccgagattttgaaccgattaaggtgatagagataatt
ccagatgaatggtctgtaagattaatttcaccgttccttctcggtctatcacgtgaaagt
cttcacgccagtagaaatagtcaagttcaaaaaaaccttaggagagctgaaaatatcaaa
gcaaagaaaggttacattaaatgcactaggaaaccagtaacaataactgacgaaacttat
tgtcgtgtttgccgccgtaccttcaacgatagcaatatggcaagatatcccaataacatt
ataacacatgttcattgcgcaaaacacaaaacactatgtcctgtaactgggcaaatgttt
ccaatgaacgaagatctttga
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