Xenia sp. Carnegie-2017 (soft corals): 124453127
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Entry
124453127 CDS
T08024
Name
(RefSeq) nuclear pore complex protein Nup160-like
KO
K14303
nuclear pore complex protein Nup160
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Pathway
xen03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124453127
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xen03019
]
124453127
03036 Chromosome and associated proteins [BR:
xen03036
]
124453127
Messenger RNA biogenesis [BR:
xen03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124453127
Chromosome and associated proteins [BR:
xen03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
124453127
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_Nup120_160
TPR_NUP160_120_M
TPR_Nup160_C
NUP160_helical
HEAT_Nup120
Motif
Other DBs
NCBI-GeneID:
124453127
NCBI-ProteinID:
XP_046859836
LinkDB
All DBs
Position
Unknown
AA seq
1431 aa
AA seq
DB search
MAGEQTSIFREVVLQIEQNIAEEIEVNTGSLSNITVRTDGLTNSEAGGGFAYKYNSRVES
IGRNRFIHWRTSRNVLELHEVSLDVNLQDSLMKIHFKNSSLLPNIEIFETSSSVVLLAAT
TNSVHRFIFPHPNKLQSHDFSLSPRVSISIPSIFSEQKLPDLYLPWNFASFSSSCNSFSA
WLFPDGHCLFNMITNDGNAVVLKLPPPQSQGVVEHYELKNAGVMQRLWSGLVPSRIRGDG
TLGDLVVSAQINPLDKETYVFALYQDHKIRVWKWQTQECVSMKNLIDDIPDDVDLQAITG
QSHMLKKAIGSTPHHLYLGVFISLLQQGQFLIYEVVYMDGEITLVSVMNLFSPKGNLIDF
VLSINQIWTLWISDEGVPFVRHALIESNQLAPTGWQHAILEDARPSEINVAEHQEPRETY
LEYIFHPGRFSKYDIDKAIKIFDSSSRRPLTTVRKTHLKQQVIALVDSQVQNAANRDEVE
FHEYSDLQLQMWSRFYACLVQYHEASNKPLGLFLDDASNVVMVIRKEAISFLRPCDDLTT
LHWKPFCEEAITSLAEELSIDDQIDRNDAQILFQCINIVTEQLTEDHIVFIEQELSCGND
VDHLMQDIAAAMLFKLDQKKEETSEKQFLMTIEIRLQKIQNLMKIVENVLNILDVNYELD
EDDFDALGDDMRSQHLNLRRLFASDLSVSLLASSYEQLCERRVCLCRDLLILLHVMTRLS
SRAGLHSLGSHTISSEHVPRATYLLRVYHSLLWFATRSVLPTPPNALDNNLKQLAALEIT
DVSNPESFLIPEITSCPILELFLSGKGGNHMRLLLQRYLKDMGNINRGSFKITIVRALQA
MTLLLWPNRANMFFAEYLVTKGQFQTLLEYCFLLDSWLTHGRSSLAFLQGQAHLVFGDYF
KAYDCFVFAVHNLNDNEPLFKKILQDCVNENERATQCFVKVMRLFEQFGSSQFVLKVANA
VLSVVEPKDPSLPIIWSNIFKHHLDLGHNDEAYAAITSNPDIERKRDCLHRFVVVLCERG
ERLQLVEYPFVDLLEEVVSIIEYHARTVDISTHQYYQLLYSFHTYRGNHRKAASAMYEYG
IRLAQELPGLESLQKQAKCYLTTMNSLRLLDEKNSWIVKPLERKDQKVVEAPNMSPKRKQ
GDEDADEALTAMIPKRRRQVTVIEISDLEKEYMLILARLQLLQHDTDSAHVTGPPLSPTE
TLVLLIQTGQYDTAFSIAKAFELSLNSIFDGLAARCVKISLYTAPMDMDERMSWLKLNDR
KCSGLTRDASLADQAWSLLNVYLRRFGSKQTSVYYKCVCTRLLSMGCSLPTWLINDYKVA
NPGELLQLFINFDLLEEATDLAMEYLNATMGHGKEYFGLEEALTANSQPVWFPYLALDQL
LTALQKLDDDDHLSAMYHGLRNQVDLYLEMVKSVSEDMIELRRRKWAGRIV
NT seq
4296 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtgaacaaacttctatctttcgcgaagttgtattacaaattgaacaaaatata
gctgaggaaatcgaagtgaacactggttcgttatcaaatatcactgtcagaacagatgga
ctcacaaattcagaggcgggtggcggatttgcttacaaatacaattcaagggttgaatca
attggtcgaaaccgtttcatacattggaggacttctagaaatgtactggaattgcatgaa
gtgtcattagatgtcaatcttcaggatagtttaatgaaaattcattttaagaactcatca
cttctacccaacattgagatattcgagacttcgtcatctgttgtgctactagctgctaca
accaattctgttcatcgtttcatatttccgcatccaaacaaacttcaaagtcatgacttc
tctctgtcgcctcgtgtttcaataagcattccatcgatattcagtgaacaaaaattgccc
gatctttacttaccttggaactttgcatcattttcaagcagttgcaattcattcagtgca
tggttatttcctgatggtcattgtctgtttaatatgataaccaacgatggaaatgcagta
gttttaaaactaccacctcctcagagtcaaggtgttgttgaacattacgagttaaaaaac
gctggtgtgatgcaacgattatggagtggacttgtaccttcgcgaatccgtggtgacggt
acccttggtgatcttgtagtaagtgctcagataaatcctcttgataaggagacgtacgtg
tttgcactttatcaagaccacaagatacgagtatggaagtggcagacacaggaatgtgta
tcaatgaagaacttgatcgatgatattcctgatgatgttgatttacaagctattacaggt
caaagtcatatgttaaagaaagcaattggttcgacgcctcatcatctttatttgggtgta
tttatatctctgcttcaacaaggacagtttttaatctacgaagttgtttacatggacgga
gaaataactcttgtttcagtgatgaatctgttttctcccaagggtaatttgattgatttt
gtcctgtcaatcaatcaaatttggacattatggatctcagacgaaggtgttccttttgtt
cgacatgctttgattgaaagtaatcagcttgcaccgactggttggcaacatgccatactt
gaagatgctcggccatcggagattaatgtagcagagcaccaggaacctcgggagacatat
cttgaatatattttccatcctggtcggttttcgaagtatgatatcgacaaagctatcaag
atttttgacagttcttcgcgaagaccgctgacaactgtcagaaagacgcacttaaaacaa
caagttattgctcttgttgatagtcaggtccaaaatgcagccaatagagatgaagtggag
tttcatgaatactccgatttgcaacttcagatgtggtctagattttatgcttgtcttgtt
caatatcacgaggcttcaaacaaaccgttgggtttatttttggatgacgcttcaaacgta
gtgatggtcatacgaaaggaagcaatatcgttcttgcgaccttgtgatgatctaacaacg
ttgcattggaaaccattctgcgaagaagctattacctcgctggctgaggaattatctatc
gacgatcaaattgacagaaatgatgcccagattcttttccaatgtataaatattgtgacg
gaacagttaactgaggatcacatcgtcttcatcgaacaagaattgagttgtggtaatgac
gtggatcatttaatgcaagatattgctgccgcgatgttatttaaacttgatcaaaagaaa
gaagaaacaagcgaaaaacagtttttaatgaccattgaaataagattacaaaaaatacaa
aatttaatgaagattgtcgagaacgttttaaatattttggatgttaattatgaactggat
gaagatgactttgatgctttaggtgacgatatgcgctcacagcatctgaatttaagaaga
ttatttgcaagtgacctctctgtatcacttcttgccagctcatatgagcagctttgtgaa
agaagagtgtgtctgtgtcgtgatttgttgatattgttgcatgttatgacaagactcagt
agcagagctggtcttcattctttgggaagtcacaccatatcttcagaacatgtgccaaga
gcgacatacctgcttcgcgtttatcacagtctgttgtggtttgcgactcgatcagtctta
ccaacacctccaaatgctctggacaataatctgaagcaacttgcggcattggaaatcaca
gatgtgtctaatccagagtcatttcttattccagaaattacaagttgtcccatcctcgaa
ttatttctctccggtaaaggaggtaatcacatgagactgttgttgcagagatatcttaaa
gacatggggaatataaaccgaggcagttttaaaatcaccattgttcgtgctcttcaggcg
atgactttgcttttatggccgaacagagcaaacatgttttttgctgaatatcttgtgaca
aaaggccagtttcagacgctactagagtattgttttcttttggattcgtggttaactcat
ggtcgatcaagtctcgcatttctacaaggccaggcacatctggtattcggtgattatttc
aaggcttatgattgctttgtcttcgctgttcataacttaaatgacaatgaaccccttttt
aagaaaattcttcaagattgcgtcaacgaaaatgaaagagcaacacaatgttttgttaag
gtgatgcgactttttgagcagtttgggtcctctcaattcgtcctgaaggttgcaaatgct
gtgcttagtgtagtcgagcctaaagatcccagtttgcccattatttggtccaatattttc
aagcatcatttggacttaggacacaatgacgaagcttacgctgcaataacctccaatcct
gacattgaaagaaaacgagactgtcttcatcgttttgtggtcgtgctatgtgaacgaggc
gaaagattgcagttagttgagtatcctttcgttgacttattggaagaggttgttagtatc
attgaatatcatgcaagaactgtggatatttccacgcaccagtactatcaactgttgtac
tcatttcatacttacagaggaaatcacagaaaagctgcaagcgcaatgtacgagtatggg
atacgattggcacaggagttacccggcttagagagtcttcagaaacaggcgaaatgctac
ctcacgacaatgaattcgcttcgtcttttggatgaaaagaattcctggatagtgaaaccc
ttggagagaaaggaccagaaggttgtcgaagctccaaacatgtcaccgaaacgcaaacaa
ggcgacgaggacgctgatgaagctctcacggcaatgataccgaagagaagacgacaagtt
accgtgattgagatttctgatcttgaaaaagaatacatgttgatcttggctaggttacag
ctgctacaacacgacaccgattctgctcacgttactggaccgccattatcaccgactgaa
actctagttcttttgatccaaactggacagtacgatacagctttcagtattgcaaaagcc
tttgaattgtctttaaattcaatatttgatggtttggcggcaagatgcgtcaagatatca
ttgtacacagctccaatggatatggatgaacgaatgtcttggctgaagctaaacgataga
aaatgctctggtttgactagagatgcaagcctagctgatcaggcatggtctttgctcaac
gtttacctgagaagatttggctcaaaacaaacctcagtttactataaatgcgtttgtaca
cgtctattgtccatgggatgctctttaccgacttggttgattaatgattataaggttgcg
aacccgggagaacttcttcagctttttatcaatttcgacctgcttgaagaagctacggat
ttagctatggaatatcttaatgcaacgatgggacatggcaaagaatactttggattagag
gaagcattgacggcgaatagtcaaccagtttggtttccctaccttgctttggatcaactt
ttgactgcgttacagaagttggatgatgatgaccatctctctgcaatgtatcatggactt
cgaaatcaagtagacttatatcttgagatggtgaaatccgtgtccgaagacatgattgaa
cttcgaaggagaaaatgggcgggtcggatagtttaa
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integrated database retrieval system
