Xenia sp. Carnegie-2017 (soft corals): 124453257
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Entry
124453257 CDS
T08024
Name
(RefSeq) transcription factor sox-3-like
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xen03000
]
124453257
Transcription factors [BR:
xen03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
124453257
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
124453257
NCBI-ProteinID:
XP_046859992
LinkDB
All DBs
Position
Unknown
AA seq
260 aa
AA seq
DB search
MATTNQTQSNGGAPTNKEQTTTKADVHIKRPMNAFMVWSRDMRRKMAAEHPRMHNSEISK
ALGMQWRVLPEKEKVPYIEEAKRLQAEHSLRHPNYKYKPRRRKPKPVKKDGRFPFPFPPT
AESGALKVPGYPQSMPPEGMYPYYQVPSSSYMQYHDPYQAARQVSYYSQSQASVHSPTGI
NGHGEISREITGYRPDVVQMHGAPPHLYPIDPISVPAQSTSVYSGTTTSLSSPTMAAHST
NSENSQIHYQQYYSQRHVIQ
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgacaaaccaaacccagtcaaatggcggtgcgccaacgaacaaggaacagacg
acaacgaaagccgatgtccatattaaacgacctatgaatgcattcatggtgtggtcacgt
gacatgcgtcgtaagatggctgcagaacatccacgcatgcataactctgagatttcaaag
gcgcttggtatgcagtggcgagtgttacctgaaaaagaaaaggtaccttatatcgaagag
gcaaaacgtcttcaggctgaacatagtttaagacatccaaactataaatataagccaaga
agacgtaagccaaaaccagttaaaaaagatggccgtttcccttttccatttccacccacg
gcagaaagcggtgctcttaaagttcctggttatcctcagagtatgccacccgagggaatg
tatccctattatcaagtaccgtcctcttcatatatgcaatatcatgatccatatcaagct
gcaagacaagtgtcttattactcacagtcacaagcaagtgtacatagtccgaccggcata
aatggccatggtgagatatctcgagagattactggatatcgccctgatgttgtacaaatg
catggtgctcctcctcacctttatccaattgatcctattagtgttcccgcccaatccact
agtgtatacagtggtactacgacgtcacttagtagcccaacaatggcggcacattccacg
aactctgaaaattctcagatacactaccagcagtattattcacaacgtcatgtgattcag
tga
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