Xenia sp. Carnegie-2017 (soft corals): 124453456
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Entry
124453456 CDS
T08024
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Pathway
xen04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
124453456
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xen04131
]
124453456
Membrane trafficking [BR:
xen04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
124453456
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
VPS8_N
TPR_VPS8_2
TPR_Vps41
WD40_CDC20-Fz
ANAPC4_WD40
WD40_Prp19
Beta-prop_DCAF4
Clathrin
Beta-prop_EML_2
EIF3I
Beta-prop_HPS5
zf_RING_Vps8
ArsA_ATPase
Beta-prop_EML
Beta-prop_IFT140_1st
DUF848
Motif
Other DBs
NCBI-GeneID:
124453456
NCBI-ProteinID:
XP_046860227
LinkDB
All DBs
Position
Unknown
AA seq
1320 aa
AA seq
DB search
MVDFESDLPAVNDVPTLESILNEKDDFGEMEVAADVKLEDILNERKPSKDNTPSPVKENV
HGSLLRHVVLHKVSAQVLSASSRMDAGLPTAMAVSTVVAVGTSHGIVLIFDAKQALQLVL
GTKAQGAEYGAVTALGINTNSTRLLCGHAKGQITMWDLLTGKCVRSILDAHPPGSAVLHV
QFTDDLTEAVCSDSGGSVFLLTFKKMIGMRTYDSQVVFSGSRGEVCVLSPLHFPESLKNY
SLAERSVLALATLTKIVVLALKPHFSVIFTFGLKGSPDSLPLLAWNFVLIQHENSNTSLH
PVLAFARDSKIYFFGFHKRHEEENVGFSKFDEVTTQFKIIALHWLDAQLICLVDAMEGIH
LMNVRNGEILEKLDLDSVELVYGSSFFKSLSNGGNVSEALALASEHSCYQSVIAYNSQLL
MLGRKSIHVFTVRTWNDRIAVFLREDDFVGALKLAFSFYNRSAKGVLGLYGNKEEKANIL
AHTIENLVQSYVEKIVKEFHETSGDENPRGYYEKAMAVCIEYCVVIDAIDILFSVIYEKI
SPAVLIKEAFLECLQSYIEEERLVSLTPIVMKDFIDHYQKMERLKDVERCLVHLDLVDVD
IDQTVKLCWKYKLYDAVIYVYNRGMADFSTPLEELLRILRETAESKLPLKEETQDLGNKL
LVYISSCFAGRAYSVGNIPQELVKPVREQVAGTLLKTLQSRGSVGVRYPNILTLLQFDTP
EFLNVLSLAFEEPGFDEDCAATATVLGRQRFINVLLEVIVQGTGFSPTQVGSFFTFLARQ
MAKTSGIYLDKVIFEQVLEYLSNPEETVRHDEREQALLELMDSGALKQFDDERILVLAEN
GKLQHQAFEFVKSKMSDDAYTDLDRDELKQTVLEKLSDFVSVDTRETSHMFMIHFPDSLK
WAIAKLEDQRQILYNFLKSIFDMSNSSKFEIPSDASINEQFIQLMCEFEASAVYRYLLSG
SNYRLQETLEIVKRYEVTDATAYLLERSGDIQAAFSLLLQALEKRVVALDRGFTNRVSAR
ELSNLLTTCKTTLVVVIQLCQRNSRKMNETERENLWFPLLEAVMSPQRRLTDMTSNHFCA
FKDLTRHVLNSMTGHISLPMILQKILQDPTYNSGKFGEIRELIMGMLDTYSYEETLLTTT
NHLLASDLHRSLSYMKSLMNRGVKLKQTICPLCQRRILKEETVANDRGDLVIFRNGNCYH
MGCLRSHYGDEDNWFSTQFSKSNVGKRNNVAIRREASASKQVEPLKKTFNLSEEQTEALQ
RLRKHQKGTSRLKMLNELLKDDDVGGFSARTRRSRLATKNLLQDDEFQLHLAPRSQYTDR
NT seq
3963 nt
NT seq
+upstream
nt +downstream
nt
atggttgactttgagtcggatttaccggctgtgaatgacgtgcctacattggaaagcatc
ttaaacgaaaaagatgattttggtgaaatggaggttgctgccgacgtgaaattggaagat
attctaaatgaacgaaagccttcaaaggacaacacaccaagtcctgtgaaggaaaacgtc
cacggttccctattaagacatgttgtcttgcacaaagtttctgcgcaagttttatcagca
tcaagtcgtatggatgctggattgcctacagccatggctgtttctactgtggttgctgtg
ggaacctctcatgggatcgtcttgatatttgatgccaaacaagctttgcaacttgtgctt
ggaacaaaagctcaaggcgccgaatatggtgcagttactgctttgggtatcaacacaaat
tccacaagattattgtgtggccatgctaaaggacagataacaatgtgggatctcttgacg
ggcaaatgcgttcgatctatcttagatgcccaccccccgggttccgctgtgcttcatgtt
cagtttacagatgatctcacggaagcagtgtgcagtgacagcggaggctccgtgtttctc
ctgacattcaaaaagatgattggcatgcgcacttacgattcccaggtggtgttttcgggc
agccggggtgaagtatgtgtgctttcacctctccattttccggaatcattgaaaaactat
tcgcttgccgaaagatccgtgctggctcttgcaactctcaccaagatcgttgttcttgct
ctgaagccacacttttcagtcatctttacatttggtttgaagggatccccagacagtctt
ccgttacttgcttggaatttcgttctcattcaacacgaaaattcaaacacctccttacac
ccggtcctcgcttttgcaagagactccaagatttatttctttggctttcacaagcgacat
gaagaggaaaacgttgggttcagcaaatttgatgaagtgacaactcagtttaagatcata
gcacttcattggctcgatgcgcagttgatttgtctcgttgacgccatggaggggattcat
ttgatgaatgtcagaaacggtgaaattctcgagaagttggatcttgacagcgtggaactt
gtctacggcagcagtttcttcaaatctttgtcgaacggtggcaacgttagcgaagctctg
gctcttgcgagcgagcattcctgttatcagtcggttatcgcctataattcacagctgttg
atgttaggacggaagtccatccacgtgttcaccgtgaggacttggaacgataggatagcg
gttttcttacgtgaagatgattttgtcggagccctgaaattggcgttttcattctacaat
cgctctgctaagggtgtgctaggtctatacggaaacaaggaggaaaaagcaaatatcctt
gctcatacgatcgaaaaccttgttcaaagttatgtcgagaagattgtaaaggaattccac
gaaacgtcaggtgacgaaaatccacgagggtactacgagaaggcaatggcagtttgcata
gaatattgtgtggttatcgatgcaattgacatattattctccgttatctacgagaaaata
tcacctgcagtgcttattaaagaggcttttctcgaatgtttacaatcctatattgaagaa
gaaaggctcgtttcacttacacctattgtcatgaaagattttattgatcactatcaaaag
atggagagacttaaagacgttgaaagatgtctcgttcacttggacttagtcgatgttgat
attgatcagacggtaaaattatgttggaagtataaattgtacgatgcagttatatatgtt
tacaatcgtggcatggctgatttttccactccccttgaggaactgttacggatccttagg
gaaactgcggagtctaaacttccattgaaagaagaaacacaagatcttggcaacaagcta
cttgtctatataagcagttgttttgctggaagagcttattccgtcggtaacatacctcaa
gaactggtcaaaccagttagggaacaggttgcaggaacgcttttaaaaacgttacaaagt
cgaggctctgtcggcgtgagatatccgaatattttaacattattgcagtttgatacgcct
gaatttttgaatgtcctatcattggcgtttgaggagcctggttttgacgaagattgtgct
gcaactgcaactgtgcttggacgacaaagatttataaatgttctccttgaagttatcgtt
cagggaacaggcttttctccgactcaagttggttccttctttacgtttctcgctcgtcaa
atggccaaaacttctggcatctatttggacaaagtgatttttgagcaggtactggaatat
ctgtctaatcctgaagagaccgttcgtcatgacgaaagagaacaagctttgttggagctc
atggactcgggagctttgaaacagttcgacgatgaacgaattctggttttagctgaaaat
ggaaaattgcagcaccaagctttcgagtttgttaaatcgaagatgagcgatgatgcatac
actgacctcgatagagatgaactaaaacagactgttcttgaaaaattatcggattttgtc
tccgtcgatacacgggagacatctcatatgttcatgatccattttcctgattctttgaag
tgggctattgcaaaattggaggatcagcgacaaattctttacaattttctgaaaagtata
ttcgatatgagtaattcatcgaaatttgaaataccgtcggatgcatcaataaacgaacag
tttatccagttgatgtgcgaatttgaagcctctgccgtgtatcgttacttgctttccgga
agcaactatcgactgcaggaaacattggagattgttaaaagatacgaggtgaccgatgca
actgcgtatttgttagagagatccggcgacatccaagcggcgttttctctactacttcag
gcgttggagaaacgtgtagtagctttggatcgaggtttcacgaatagagtcagcgcaaga
gaactgagtaatttgctgacaacatgtaagacgacgctggtggttgttatacagttgtgt
cagcgtaattctcgaaaaatgaacgagactgagcgggagaatttgtggtttcctttgctg
gaagcagtcatgtctccacagcgaaggctcactgatatgacgagcaatcatttttgtgca
ttcaaagatcttactcgccatgttctcaacagtatgacaggccatatttcgttaccaatg
atattacagaagattttgcaggatccaacttataactcgggaaagtttggcgaaattcgc
gaactgatcatgggaatgttggacacttacagttatgaagagacgctgctgaccacaaca
aaccacctgctcgcctcagatctccatcgctcgctaagttacatgaaaagtttgatgaat
cgcggtgtgaagctaaaacagacaatttgtccgctttgtcagcgacgcattttgaaggag
gagacggtagccaacgatcgtggtgatctagtgatatttagaaatggtaattgctatcat
atgggttgcttgcgtagccattatggcgatgaggacaactggttttccacacaattttca
aagagcaacgtcggcaagcgtaataacgtcgctatacgtcgtgaagcatcggcatcaaaa
caggtcgagcctttgaagaaaacatttaacttgagtgaggaacaaacggaagcactacaa
agactaagaaaacatcaaaaaggaacatcgcggttaaagatgttgaatgaactgttgaaa
gacgacgatgtcggaggtttttcagctcgaacacgaaggtcaaggttagcaaccaagaac
ttgttacaggatgacgaatttcagttacatcttgcccctcgttcccagtacacagacagg
tga
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integrated database retrieval system
