Xenia sp. Carnegie-2017 (soft corals): 124453465
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Entry
124453465 CDS
T08024
Name
(RefSeq) PDZ and LIM domain protein 7-like
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Pathway
xen04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
124453465
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xen04990
]
124453465
Domain-containing proteins not elsewhere classified [BR:
xen04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
124453465
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
PDZ
PDZ_6
PDZ_2
DUF4749
Motif
Other DBs
NCBI-GeneID:
124453465
NCBI-ProteinID:
XP_046860235
LinkDB
All DBs
Position
Unknown
AA seq
873 aa
AA seq
DB search
MAGEYLVNLTGGGPWGFRLQGGKDFGTALAIARVTPGGKADLKGILEGDIIDEINNKPVE
HLVHMDAQNLIKASRDTLQLRLIRKIGNTAKSMGSKSPIVITNMTQSANVDHKFNAKPRP
FGVPSSSSSIVQVKPTSKPAKDPDNFDDSEVLKMLKTSKINDSGLEPSSSNPPEDDLPPP
PPEAFPSEYDLPAGQSRSFKLLQKHIDQGEPPASVFSQTDGDKNRVAPILRPYVVTSNSR
ISKPMNTKEPPPCPPGVKPMQVLPAEVNFTLPSQAFRAAYAERRQQTPASQFSKYQGKST
LIEKLFSCLCTESLGFISCTDKRTSAPNAKVFQTINKHVRPSRVIIAHHNRNRINCLYFF
IIHFKMAGEYLVNLTGGGPWGFRLQGGKDFGKALTIARVTPGGKADLKGILEGDIIDEIN
NKPVEHLVHMNAQNLIKASRDTLQLKLIRKTGNSAKSITSKSPKVNSNMNDSTRTDHKFN
AKPRPFGVKSSKITTGKGKPVSETAKDPDNFDDSKVLKMLKMSKINDSSLATSSNPPKDD
FPSPPPEAHIYEDNMPTGQSRSFKLLQKHIDQGDTLPVVLSQTDSNRKRVAPPLHSYSGS
SNSRVGKSLVQKPMNTKDPPPCPPGVKPMQVLPSEVNFTRPSEAARAAYAERRLQSIQPI
RPDPTPSSPASHTYRSPAVPAPTSRPKAPSPWTPLNTGSPHCHGCGQVITGSFLSALGRS
WHIEHFNCAGCRKSLQNEGFLEESENLYCEYCYDMKFAPHCVVCNETIFGPCVKAIGKMF
HPEHFICAHCGKQIANESFHLDGGKPYCARDYKELFCVKCCACNQVISGGDRWLEALDKP
WHADCFRCAVCGSNLEYTGFYSMGTQAVCPLHA
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atggctggcgaatatttggtcaatttaacaggaggtggaccatggggttttagattgcaa
ggtggaaaagactttggaacagctttagccattgctcgggtaacaccaggtggaaaagcg
gacttaaaaggtatacttgaaggtgatattatagatgagatcaataacaagcctgtggag
catctcgttcacatggatgcgcaaaatttaataaaagcttcccgagacacactgcaacta
agactgattagaaaaattggaaatactgcaaaatccatgggatctaagtcgccaatagtc
attacaaacatgacccaatctgctaacgtcgatcacaaattcaatgcaaaacctagacca
tttggtgttccaagctcatctagttctattgtacaagtaaaacctacatcaaaaccagca
aaagatccagataacttcgatgactcggaagttttaaagatgctgaagacatcgaaaata
aatgattccggtttggaaccttcttcatcaaatccacctgaagatgatcttcctccgcct
ccgccagaagcttttccttcagaatatgatctaccagctggacagtcgagatccttcaaa
ttgcttcaaaagcatatcgaccaaggggagccccctgcaagtgttttctcccagacagac
ggcgacaaaaaccgtgttgctcctatcttgcgtccttacgtagtaacttcaaattctcgt
attagcaaaccaatgaatacgaaagagccacccccctgtcctccgggtgtcaagcccatg
caagtgttaccagcagaagtcaatttcacgctaccttcacaggcatttagggcagcctat
gctgaacgacgacagcaaacacctgcatcgcaattttctaaataccaaggaaagtcgaca
ttgattgagaaattgttctcttgtctctgtacagaatcattgggattcatttcctgcacc
gacaagcggacatctgcacctaatgcaaaagtttttcaaacaataaacaaacacgtgcga
ccttcccgtgtcataattgcacatcataaccgcaatcgcattaattgtttatactttttc
ataatccatttcaaaatggctggcgaatatttggtcaatttaacaggaggtggaccatgg
ggttttagattgcaaggtggaaaagactttggaaaagctttaaccattgctcgggtaaca
ccaggtggaaaagctgacttaaaaggtatacttgaaggtgatattatagatgagatcaat
aacaagcctgtggagcatctcgttcacatgaatgcgcaaaatttaataaaagcttcccga
gacacactgcaactaaaactgattagaaaaactggaaatagcgcaaaatccatcacgtct
aaatcaccaaaagtcaattcaaatatgaacgactctacaaggactgatcataaattcaat
gcaaaaccaagaccatttggcgttaagagttcaaaaattacaactggaaaagggaaacct
gtatcagaaacagcaaaagatccggataacttcgatgattcgaaagtcttaaaaatgctg
aagatgtcaaaaataaacgattccagtttggcaacttcatcgaatccacctaaagatgat
tttccttcacctccaccagaagcccatatttacgaagataatatgccaactggacagtcc
agatctttcaagctgcttcaaaaacatatcgaccagggggacactcttccagttgtatta
tcacaaacagatagcaatagaaagcgtgtagctcctcccttgcattcttactcgggatca
tcaaattcacgagttggtaaatctctcgttcaaaaaccaatgaatacgaaagatccacct
ccctgtcctcctggtgtcaagcccatgcaggtgttaccatcagaagtcaactttacacgg
ccttcagaggcagctagggcagcctatgccgaacgacgactgcaaagcatacaacccata
cgcccagatcccacaccatcttctcctgcgtcgcatacctatcgttcaccggctgtaccc
gcccctacttctaggcctaaagccccaagcccatggacaccgttaaatacaggatcccct
cattgtcatggatgcggacaagttattacaggctcattcttaagcgctctcggtagaagt
tggcatattgaacattttaactgcgcgggttgcaggaaatcacttcagaatgagggattt
cttgaagaatcagaaaacctctattgtgaatattgttatgacatgaaatttgcacctcac
tgcgtcgtatgcaacgagactatttttgggccatgtgtgaaagccattggtaaaatgttt
catcctgagcatttcatctgcgcccactgtggtaagcaaatcgcaaacgagagttttcat
ttggacggaggtaaaccatactgtgctcgggactacaaagaattgttctgtgtaaaatgt
tgcgcatgtaatcaggtcattagtggtggagatcgttggttagaagcactcgataaacct
tggcatgctgactgctttagatgcgcagtgtgtggtagcaatctagaatatacgggattc
tacagtatgggtacgcaagccgtttgcccactacacgcctga
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