Xenia sp. Carnegie-2017 (soft corals): 124453592
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Entry
124453592 CDS
T08024
Name
(RefSeq) DNA-binding protein SMUBP-2-like isoform X1
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xen03009
]
124453592
03012 Translation factors [BR:
xen03012
]
124453592
Enzymes [BR:
xen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
124453592
5.6.2.5 RNA 5'-3' helicase
124453592
Ribosome biogenesis [BR:
xen03009
]
Eukaryotic type
Other ribosome biogenesis factors
124453592
Translation factors [BR:
xen03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
124453592
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_11
AAA_12
SMUBP-2_HCS1_1B
R3H
AAA_30
zf-AN1
AAA_19
Viral_helicase1
Helicase_RecD
ResIII
DEAD
UvrD-helicase
PhoH
AAA_22
AAA
nSTAND3
NTPase_1
Flavi_DEAD
UvrD_C_2
AAA_16
Transp_Tc5_C
Motif
Other DBs
NCBI-GeneID:
124453592
NCBI-ProteinID:
XP_046860333
LinkDB
All DBs
Position
Unknown
AA seq
1012 aa
AA seq
DB search
MVDLNVYVKETLELLNLERQTEIDESRAIYENTECDRLEKKGVCLRKMVLYDRRTGLYGR
TLLTLGNGKGQKKKTSPLSAHCFTVGDIAGLSYSSTENNIDELSSGVVTSVSETSIVIAF
DESFDSQLIDEHRLMKVTRLVNDVTFKRMKRTIESLGQMPSARFCSPQLISVLFGNTSLG
LPLNIQNLVKSSHLKHDQEYFNPGLNVSQQEAVQFALTCHDIGIIHGPPGTGKTTTIIEI
IIQAVKKYDMKILACAPSNVAVDNILERLACFKIKAVRLGHPARLMDKLQAYSLDAILNQ
SDETSIVKDVRKDINTAVRKLHDTRNFGDRSKLHSEIKILRKELRKREGKALKQVLQNAE
VILSTNISACDDGPLKHLPKDHFDFVVIDEAAQALEAACWIPLQWAPRCILAGDHKQLPP
TITSCEAAQRGLGVTLMERVIKMLGDKVVYMLTTQYRMNDKIMQWASQQLYDGKLLADSS
VAQHVLSDLPWVSDTELVSLPLLMIDTAGCDLFELQTEDEESKGNEGEADVVLALVEELI
DSNVKQQDIGVITPYNLQVELLRSRLSSRFPAIEIRSVDGFQGREKEVIVISMVRSNTKG
NIGFLSERRRMNVAVTRARRQLMIVGDSSTISHDSFLNSLVKYISDHGETWSAEQYRNHI
GETTYYQGTYNHTKSSNAEKLKKNKTNKALSTKSTKGTSTMRTKQNTSEISQKKVRSNDN
SQENLNNVCEQDDIEKLEAQIKTFVIDPTMTHLVFPSHLSSKERYTVHSMAEELGLEHES
RGVGNERFIAVSKKSMLKEEGELNNEIKTKKIETESVCNTKVNESQLKDDMAICGHCGKE
MMSSNIFLHEIRCEYNRPETQTDGATGIGKGGRDQRFRSKNSVARKKKNSKSQEKQSGVK
KSDLQNQEDDFDELLAEFRQNDSQCAISKCKKSVLTLGQKCRYCNNMYCIGHRLPEDHGC
HQVVKEQTRSGIGMRKQISQKTAAKRTLLEKKLDVKIKDLEIGRKSKIKNGK
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atggtggatctgaatgtgtacgtgaaagaaactctagagctgttgaatttagaaagacaa
acagaaatcgacgaatctagggctatttacgaaaacacagaatgtgatagattagagaaa
aagggtgtttgcttgcggaagatggttttgtatgatcggagaaccggtttgtatggccga
actctcctgactttagggaatggaaaaggtcagaaaaagaaaacatcacctttatcagca
cattgctttactgttggtgatattgctggcctctcttattcttctactgagaataatata
gatgaactgtcatcaggtgttgttaccagcgtatcggagacgtccattgttattgcattt
gatgaatcttttgattctcaattgattgatgagcatcgtttgatgaaagtcactcgtttg
gtgaatgatgtcactttcaagagaatgaaaagaactattgaatctctgggtcaaatgcca
tctgccagattttgctcgccacaattgatatccgtcctctttggtaacacctctctgggt
ttacctcttaacattcaaaatcttgtaaaaagctctcatttgaaacatgatcaggaatat
tttaatccaggtctaaatgtaagtcagcaagaggcagttcagtttgcattgacttgtcat
gatattgggatcattcatggaccaccagggacaggaaagacaacaacaattattgaaatt
atcattcaggctgttaagaagtatgacatgaaaattttggcttgtgcaccatctaatgtg
gctgtggataatatattggaacggttagcatgttttaaaataaaggctgtgcgtttagga
catccagccagactaatggataaactacaggcctactctcttgacgcaatccttaatcaa
tccgatgaaacaagcattgtcaaagatgtgagaaaggacatcaacactgcagtaagaaaa
cttcatgatacaagaaattttggcgatcgttcaaagctgcattcagaaatcaaaatattg
cgtaaagaattgcgaaaacgtgaaggaaaagccctgaaacaagtcctccagaatgctgag
gttattctgtcaacaaatatatctgcatgtgatgatggtccattgaaacatcttccaaaa
gatcattttgattttgtggtcattgatgaggctgctcaagcactagaagctgcatgctgg
ataccattacaatgggctccaaggtgtatcttagctggagatcataaacaattaccgccg
accattacgtcgtgtgaagctgcacaacgtggactgggagtgacattgatggaaagagtt
ataaaaatgcttggagataaggttgtttatatgctgacaactcaatatagaatgaatgat
aaaataatgcagtgggcatcacagcaactttatgatggaaaacttctggctgactcatct
gtggcgcaacacgtgctatcagacttaccatgggtgagtgacacagaactagtgtcgcta
cctttattgatgattgataccgctggctgtgacctatttgagcttcagactgaagatgag
gaatccaaaggaaatgaaggagaagcagatgttgtgctcgcacttgtagaggaattgata
gatagtaatgtcaaacagcaagatattggtgttattacaccctacaatcttcaggttgaa
ctcttaagatcacggctatcctccagattcccagcaattgagatcagatcagttgatgga
ttccaagggagggagaaagaagttattgtcatatcaatggtgcgctcaaacacaaaaggt
aatattggatttctttcggagagaagacgaatgaatgttgctgttacgagggctcgaaga
cagttgatgattgttggcgattcaagtacgatcagtcacgattcttttctcaattctttg
gtcaaatacatcagcgatcatggtgaaacttggtcagcggaacaataccgaaatcacatt
ggtgaaacgacttattaccaaggcacttacaaccacacaaaatcttccaacgcagaaaaa
ctcaagaaaaacaaaactaacaaagccttatcaaccaaatctacaaaagggacatctaca
atgagaactaaacaaaacacatcagagatttcacaaaagaaagtgaggtcaaatgataat
tcacaagagaatttaaacaatgtttgtgaacaggatgatattgaaaaacttgaggctcaa
attaagacatttgtaattgatcccactatgacgcaccttgtctttcccagtcatctcagt
tcgaaggaacgttatacagttcactcaatggccgaggaacttgggctcgagcatgagagt
agaggtgttggaaatgaacgtttcattgctgtgtcgaagaaatcaatgctgaaggaggag
ggtgagcttaataatgaaataaaaacgaagaaaattgaaacagagtccgtatgcaacacg
aaagtaaatgaatctcagttgaaagatgacatggctatttgtggacactgcgggaaggaa
atgatgtcttccaacatatttttacatgaaataagatgtgaatataatagaccagaaact
caaaccgatggcgctactggcattggtaaaggaggtcgggatcaaagattcagatcgaaa
aacagtgtggcacgcaaaaagaaaaacagcaagtcgcaggaaaaacagtctggcgttaaa
aaatccgacttacagaaccaggaggatgattttgatgaacttttggcagaatttcgtcaa
aatgactcgcagtgcgctattagcaaatgcaaaaagagtgttttaactctgggacaaaaa
tgtcgttattgcaacaacatgtattgcataggacatcgtttacccgaggatcatggttgt
catcaggttgtcaaagaacaaactcggtctggtattggcatgcgcaaacaaatctcgcag
aaaactgcagcaaagcgcacgcttttggaaaagaaattggatgttaagattaaagatttg
gagattggtcgtaaaagtaaaattaagaatggcaaataa
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