Xenia sp. Carnegie-2017 (soft corals): 124453612
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Entry
124453612 CDS
T08024
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5 isoform X1
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Pathway
xen03018
RNA degradation
xen03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124453612
09123 Folding, sorting and degradation
03018 RNA degradation
124453612
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xen03019
]
124453612
03041 Spliceosome [BR:
xen03041
]
124453612
Messenger RNA biogenesis [BR:
xen03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
124453612
mRNA degradation factors
5'-3' decay
Lsm complex
124453612
Spliceosome [BR:
xen03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
124453612
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
LSM14
Motif
Other DBs
NCBI-GeneID:
124453612
NCBI-ProteinID:
XP_046860362
LinkDB
All DBs
Position
Unknown
AA seq
93 aa
AA seq
DB search
MRMNNMANPTSQLLPLELIDKCVGSKIHIIMKSDKEIVGILLGFDDFVNMVLEDVTEFEN
TSEGRRVTKLDQILLNGNNITMLIPGGEGPDMM
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgaggatgaacaacatggcgaatccgacttctcagttgttgccgttggagctgatcgac
aaatgcgttggatccaaaattcacattataatgaagagcgataaagagattgtgggaatt
cttcttggctttgatgatttcgtcaatatggtactggaggacgtaacagaatttgagaac
acgagcgaaggtcgcagagttacaaagttggatcagatcttgctaaatggaaacaacatt
actatgctcatacccggaggagaaggaccagatatgatgtaa
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integrated database retrieval system
