Xenia sp. Carnegie-2017 (soft corals): 124453680
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Entry
124453680 CDS
T08024
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Pathway
xen04140
Autophagy - animal
xen04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
124453680
04148 Efferocytosis
124453680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xen04131
]
124453680
Membrane trafficking [BR:
xen04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
124453680
Hops complex
124453680
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-RING_Vps41
zf-RING_2
zf_RING_Vps8_fungal
zf-C3HC4_2
zf-RING_5
DUF5781
zf-RING_UBOX
zf-rbx1
zf-RING_16
zf-C3H2C3
zf-RING_11
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
124453680
NCBI-ProteinID:
XP_046860460
LinkDB
All DBs
Position
Unknown
AA seq
991 aa
AA seq
DB search
MVRANSPEKTKMASILEQYESELKSSGNIPSNRQILSDEPIATGYVDFTDDAPMFRREKK
NFRPPAKIIDISVCNSTVIIALSYSVMRLNLVNTDKIEGKDRSVQAEDVVYKIFQDPTAR
HIIICLQSFESLYLARTSKKVKPISKLKGHLIEAVAWNKTRLNETTTQAILIGTRKGLIF
ETELDNEEKFFQAAFEKYCRQLHNINSGVNRAEPITGMVFEKFPRSDRTFVVMVTTYSRL
YHFIGEVSLSEPPLFVPLFSQFETSPASFIELPSENLLRSQLALYNAKARGTPSSFAWLT
GPGAYCGGLNFDSLQGNNTSIISNARLLPYVTADGESSSPPLALALTEFHVLLLYKDRFE
AVCLLNDQIVFQDLLPERFGEMRGMVTDPVKKTIWIFSVNAIFEYHINKETRHVWKLYLE
KGMFQEAEEYAKDNPLHIDEVLRKKAENFFNEKQYRPSAATYALTQASFEEVTLKFIQVP
ESDSLKVFLVKKLNNLDSKDKTQITMLTIWLVELYLNELGELKNGGAEKQSEFLSVQEDF
RKLLATSKVKMSFEESKQTAYELIASHGDVENLIFLAMLMKDFERVIHHHIQHDDFGAAL
DVLKKQNEPELYYKFSPVLMQHIPEDTVNAWIDQNKRLDPRKLIPALIYYEQKEDKALIE
QAVRYLDFCVDILGVQDQAIHNYLLSLYVKQKEHVSLMRYLHLQGQDKDEVRYDLEYALR
LCSENELKQACVHIYSTMGLYEEAVDLALMFDADMAKFQASKPEEDEALQKKLWLRIARH
VVEKKEDVKTAMQVLNDFKQIKIEDILPFFPDFVTIDHFKDAICSSLEEYNKHIHELKTE
MQEATESAENIRQDIQEMKNRYGVVEVDKKCLLCLQPLLTRSFHIFPCHHAFHTDCLVDE
VLLHLKGRQRNRLEFLKRKLFRTDYEGSRNAGRNRENDPIILPEDSVEKLMADLDELIAN
ECILCGEHMIRSIDQPFITQDEYDEVVKSWA
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgggcaaatagtcctgaaaaaaccaagatggcctctattttagagcaatacgaa
agtgagctcaaaagcagtggaaatatcccgtcaaataggcaaattttgagtgatgaaccg
attgcaactggctatgtggatttcacagatgatgcaccgatgtttcgtagggaaaaaaaa
aatttcagacctcctgcaaaaatcatagatatatcagtgtgcaactcaactgtcatcatt
gctttgagttattctgtgatgagactaaatcttgtcaacactgataaaattgaaggtaaa
gatagaagtgtccaagcggaggatgttgtgtataaaatattccaggaccctactgctaga
catatcataatttgtttacaatcttttgaatccctttaccttgcaaggacaagcaagaaa
gtaaaacccatttcaaaattaaagggtcatcttattgaggctgtggcatggaacaaaacg
agactgaatgagactactacacaagcaattttgattggaactagaaaaggattgattttt
gaaactgaattggacaatgaggagaagttctttcaggctgctttcgagaaatattgtaga
cagctgcacaatatcaatagtggagtgaacagagctgaaccaattactggaatggtgttt
gagaaatttccaagatcagatcgaacttttgttgtgatggttacaacgtacagccgattg
taccattttattggtgaagtttcattgtccgagccgcccttatttgttccattgttttct
caatttgaaacaagtcctgcaagtttcattgaactaccatctgaaaacctattgaggagt
caattagctttgtataatgcaaaagcaagagggacaccatcatcatttgcatggttgact
ggtcctggtgcctactgtggaggactaaattttgactcattacagggtaacaacactagc
attatatcaaacgcaaggcttttaccttacgtcacagctgatggagaaagttccagtcct
ccgttggcgcttgctctgactgaatttcatgttttacttttgtataaagataggtttgaa
gccgtgtgcttattgaatgatcaaattgtttttcaagatttactccctgaaagatttggg
gaaatgcgaggaatggtaaccgatccagtaaagaagacaatatggattttttcagtcaat
gccatctttgaataccacattaacaaagaaacaagacatgtttggaaattatacttggaa
aaggggatgttccaagaagctgaagaatatgccaaggacaatcctttgcatattgatgaa
gtattaagaaagaaagcagagaacttctttaatgaaaaacaataccgcccttctgcagca
acgtacgccttaactcaagcatcttttgaagaagttactttgaagtttattcaagtacct
gaatcggattcgttgaaagtttttcttgtaaaaaaattgaacaacttagacagcaaggat
aaaactcaaatcaccatgcttaccatatggttggttgaactctatcttaatgaactggga
gaactgaaaaatggtggggctgaaaaacaatcggaattcctgtctgttcaggaagatttt
agaaaacttttagcaacaagtaaagtgaagatgtctttcgaagagagtaaacaaacggcg
tatgaattaattgccagtcacggagacgttgagaatcttatctttcttgcaatgttaatg
aaagattttgagcgagtaattcatcatcacattcaacatgacgattttggagcagcttta
gatgttctgaaaaaacagaatgaaccagagctgtactataaattctctccagttttgatg
caacatattccggaagataccgtcaatgcttggattgaccaaaacaaaagacttgatcca
agaaagctcattcctgctttgatatattacgagcaaaaggaggacaaggctctgatcgaa
caagcggttcgttatttagacttttgtgttgatatccttggtgtacaggatcaagccatt
cacaattacttactttccttgtacgtcaagcagaaggaacacgtatctctaatgagatat
ctacatttacaagggcaggataaagatgaagtcagatacgatttggagtatgcattaaga
ttatgttcagaaaatgaacttaagcaggcatgcgttcatatttacagcacgatgggcctt
tacgaagaagctgttgacttggcgttgatgtttgacgccgatatggcaaaattccaggca
agtaagccagaagaggacgaagctctacagaagaagctttggttgcgaattgcgagacat
gttgttgaaaaaaaggaggatgtcaaaacagcaatgcaagttttaaatgatttcaagcag
atcaaaattgaagacatacttccgttctttccagattttgtgacgattgaccattttaag
gatgcgatttgttcgtccttagaggaatacaataaacacatccatgaactaaaaacagaa
atgcaagaagcgactgaaagtgccgaaaatattcgtcaagatattcaggaaatgaaaaac
agatacggtgttgtggaggtagataagaaatgtttgctgtgtttacaaccattgctgacc
agatcattccacattttcccttgtcatcatgcatttcatactgactgtcttgtcgacgaa
gttttgcttcatcttaaaggacgacagaggaacagactagaatttttgaaaagaaaactc
tttcgaacagactacgaaggctcacgaaatgctggtcgtaaccgagaaaatgatccaata
atattacctgaagattcggtggaaaaactaatggcagatcttgacgaacttatagcaaac
gaatgtatcttgtgtggtgaacacatgatacgatcaatcgatcaaccatttattactcag
gatgagtatgacgaagttgtaaaaagctgggcttga
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