Xenia sp. Carnegie-2017 (soft corals): 124453704
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Entry
124453704 CDS
T08024
Name
(RefSeq) nuclear pore glycoprotein p62-like
KO
K14306
nuclear pore complex protein Nup62
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Pathway
xen03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124453704
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xen03019
]
124453704
Messenger RNA biogenesis [BR:
xen03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124453704
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nsp1_C
BRE1
ATG16
DUF16
Motif
Other DBs
NCBI-GeneID:
124453704
NCBI-ProteinID:
XP_046860496
LinkDB
All DBs
Position
Unknown
AA seq
676 aa
AA seq
DB search
MSFGNDNLSFGGLPVGSGNRSSSATTSTAFSLGNPVSQGFNFGASTIRPTLSFSTPSTSA
PLFGTQTSNPPTFGTSAGNLAKPVAVTGMFGSAPANNQNAGSGSSSALFSGFMAPKTAAS
TLTSNNSLFGASTTASYASFSFGSSIQAAKPSGPGLQTSASATPLFGSSVQPIQPGGFGL
QTSTSSTPLFGSSGQPTQPGGLASQTTTSSTPLFGSSGQASKPGWLGLQTSTSSALSFSS
TQSTNSGLKFGASESYVGTGKQGLSFGSATSSTAPTPGQTNFTFGGSTSNTTLATSLAPG
FKLGGASSFVQAKSTAPTLQLASNAVTSSTSQTTSGFSFGAGNGVPSTVSKSSTSINLPL
GQSSTGFNLSGQIAGQLKTTTSTSSPSTLSQPRTIGTGTFGDGVTGTQSGQRSSVIATTT
TKPSLGFSLPHTTATTSGFKLSGSTTASTSFGFQATTSVASTSSITSATSGSLTANTSSE
KFTYKQLEDLVNKWNIELEDMERGFLEQAAQINVADRELMENGEKITLLHHEVEKAKLEQ
KRLDQELDFLVSQQIELEELLKPLEESVKQHGPDNFQEPDREREKIYSMAEKCDGQLKGM
VQDLRDIIDYLNSTNASHQDDNPVVQIAKILNVHMDSLHWIDQNSALLQKRVDEIGRMSE
LRRKEHERFFRMRFDE
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgagttttggtaatgataatttgtccttcggtggtctcccggttgggtctggtaatcgt
tcttcttcagctacaacttcaactgcattttctttgggcaacccagtaagtcagggtttt
aattttggcgcatccaccatcagacctactttatcattctcaacaccgagcacttcagct
cctctatttggaacccaaacttccaatcctcctacatttggtacaagtgcaggtaacctg
gctaaacctgttgccgtaactgggatgtttggcagcgcaccagcaaataatcaaaatgca
ggtagtggctcatcttctgccttgttcagtggttttatggctccaaaaactgcagcttct
acattgacatcaaataatagcttatttggagcaagtacaacagctagttatgcttcattc
agttttggctcttcaattcaagcagccaaacctagcggaccaggattacagacaagtgcg
tcagctacaccattgtttggttcttctgtacaaccaatccagcctggcgggttcggttta
cagacaagtacatcatccacaccattgtttggttcttctgggcaaccaacccaacctggt
gggttagcctcacagacaaccacatcatccacacctttatttggttcttcagggcaagca
tccaaacctggctggttgggattacagacaagtacatcatctgcgctgtctttttcgtct
actcagtcaaccaattctggactgaagtttggtgcgagtgaaagctatgttggaacaggc
aaacaagggctgtcatttgggtcagcaacatcttcaaccgctcctacccctggccagact
aatttcacatttggaggttctacatccaataccaccttagcaacgtctctcgcaccggga
ttcaaacttggtggtgcatcaagctttgtgcaagcaaaaagcactgcccctacccttcag
ttggcttcaaatgcagtaacttcatcaacatcgcaaacaacctcgggattttcatttggt
gcaggaaatggtgtaccgtccacggttagcaagtcaagtacttccataaatcttcctctt
ggtcaaagttcaaccggtttcaacctttccggacagatcgctggacaattgaagacgacc
acttccacaagttcaccttcaacgttgtcgcagcctcgcaccattggtactggaacgttt
ggcgacggtgtgactggaactcagtcagggcaaagatcgtctgtcatagcaactacgact
actaaaccatctctgggctttagcctgcctcacacgacagcaactacatcaggcttcaaa
ttatctggatctacaactgcgtccacctcgtttggctttcaggcgaccacgtctgtggca
agtacgtcctccattacgtcagcaacatctggatctctaacagccaatacaagttctgaa
aaatttacgtacaaacaattggaggatttagtgaataaatggaacattgaactggaagat
atggaaaggggatttttagaacaagcagcccaaataaacgtggcagacagagaactaatg
gaaaatggcgaaaagatcacactactccatcatgaagttgaaaaagctaaactcgaacaa
aaaagattagatcaggagcttgattttttggtttctcaacaaatcgagctagaagagtta
ttgaaacctctcgaagaatctgtgaaacaacacggtccagataacttccaggaacccgac
agagagcgcgaaaagatatactcgatggcagagaaatgcgatggtcaattaaaaggaatg
gttcaagatttgagagacataattgattaccttaactccacaaatgcaagccatcaagat
gacaatcctgttgttcaaattgcgaaaattctcaacgtacatatggactctttgcattgg
attgaccagaactcggctttacttcaaaaaagagtggacgaaatcggccgaatgagcgaa
ttaaggagaaaagaacacgagcgattctttagaatgagatttgacgaataa
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