Xenia sp. Carnegie-2017 (soft corals): 124453710
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Entry
124453710 CDS
T08024
Name
(RefSeq) chondroitin sulfate synthase 1-like
KO
K13499
chondroitin sulfate synthase [EC:
2.4.1.175
2.4.1.226
]
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Pathway
xen00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
xen01100
Metabolic pathways
Module
xen_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
124453710
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
xen01003
]
124453710
Enzymes [BR:
xen01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
124453710
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
124453710
Glycosyltransferases [BR:
xen01003
]
Glycan extension
O-Glycan
124453710
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CHGN
Fringe
Glyco_transf_7C
Galactosyl_T
DUF7164
Motif
Other DBs
NCBI-GeneID:
124453710
NCBI-ProteinID:
XP_046860506
LinkDB
All DBs
Position
Unknown
AA seq
776 aa
AA seq
DB search
MSSVSLHQCRPTGVFRVQKPVSLSVRRLRVCRRLKRMTKNSTTRVVFALLLGGLISFTFS
VWTSHLVRFPTIPCKRVLKTHVDNAVSNVRTRPKRLRDELNAKGFLFVSVMTSSMYIGTR
ARGVYDTWGRDVPGRLNFFTGKINITDDVADLPVIQLDVPDDIYPPQTKSFKMIEYVSKH
FADDYEWFIRADDDVYIRPHKLRYYLKKLDSSEDLVIGQPGVGKKDEIGKLGLGPRDNFC
LGGPGIMMTSSVLKNIGPNIVVCLNNTSTTHEDVEIGRCLRQYGGVMCPWGFEARELFVQ
IYEHPFQAYHGELDTIESIKGISYHPVKDPAYMRRMHVYFNSHHVHRLMLRKRSVQRALT
NMAPFLEGDMHWTKSQRLLSDLSDKSHRQARNSSQPWESLDFSKVWALYDKPPLRYIHDG
TEAAMKKVVDFAKETITREGEPYLYENIKFDRWHNGYMRVDPKVGTEYRLEIGTRAQLHD
KKMKLVITRSRRSVHLRQTFDKFIVKSERTLASDSAKATLHFIVPLVDRLENLKRFLSSF
ESEFLVRNDPVKLLVVYFPDAAPSVQQKQAFDRYAAKYPSVEFKWLDVKGPFKRAVALQK
GTDYFGNNSLLYFCDVDLVFRQEFAERCRANAVIGKRAYFPVMFSQFNPKITFAKRPHPG
HYYYAKEAGFWRWYSFGPVCAYAKDIKDSGGLNTGLIGWGLEDVDLYEKFLKRSDIEIFR
APDLGLVHVYHQHASCDPRSNEEQLADCRRAQADIYSSASSSVDYLHDKGYLGFFL
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgagttctgtatcgttgcatcaatgtcgaccaactggtgtcttcagggttcaaaagcct
gtatcgttatccgttcggcgactaagagtttgccgacgtcttaaaagaatgacaaagaat
tcaactactcgagtggttttcgctcttcttctcggtggtctcattagtttcacatttagc
gtttggacaagtcatttggttcgatttccaaccataccttgcaaacgtgttcttaaaaca
cacgtggacaatgcggttagcaatgttagaactcgaccgaaacggctaagagatgagcta
aacgcgaagggatttttatttgtatccgtcatgacttccagtatgtatattggcacaaga
gctcgtggagtttatgatacttggggaagagacgtacccggccgtttgaacttttttacc
ggtaaaataaacataacggatgatgttgcagacttgccagtcattcaacttgatgtgcca
gacgatatttacccaccgcagacaaaatcctttaaaatgattgaatatgtatcgaagcac
ttcgctgacgattacgaatggtttataagagcggacgacgatgtgtacatacgaccgcac
aaactacgttattatttaaagaagttagatagttcggaagatttggtcataggtcagccg
ggtgttggtaaaaaagacgagataggcaaacttggccttggtcctagagataatttctgc
ctcggtggaccaggcataatgatgacatcaagtgttttaaagaatattgggccaaatatt
gttgtttgcctaaacaacacgagcacgacgcacgaagatgtggaaattggtcgatgcctg
cgtcaatatggcggagttatgtgcccatggggttttgaggcaagagaactgttcgtacaa
atctacgagcatccctttcaggcttatcatggggaactggataccatagaatctatcaaa
ggtattagctaccaccctgtaaaagatcccgcctacatgcgtagaatgcacgtgtatttt
aactcgcaccacgtgcatcgtttgatgttgcgtaagcggtccgtacagcgagcacttacg
aacatggccccgtttttagagggggatatgcattggacaaaaagtcagcgattgttatct
gatcttagcgacaaatctcatcgccaagcgcgcaacagctcgcagccttgggagtcgtta
gatttttctaaagtgtgggctctttatgataaaccaccgttacgttacatacacgatggc
accgaagcagccatgaaaaaagttgttgattttgcaaaagagaccataactcgtgaagga
gaaccgtacttgtacgagaacatcaaattcgataggtggcataatggctacatgcgtgtt
gacccaaaagttggcactgaatatcgtttagagatcggcacaagagcgcaactgcacgac
aagaagatgaaattagtgatcacgcgttctcgccgtagcgtgcatctgagacaaactttt
gacaagtttattgtgaagtccgagaggacattagccagcgactccgcaaaagcgacgctt
cattttattgtgcccctcgtggatcgcttagaaaacctcaagcgtttcttaagcagtttc
gagtcggagttccttgttcgcaatgatccggtaaaattactcgtcgtttactttccagat
gctgcaccctccgtgcaacaaaagcaggcgttcgatcgttacgctgcgaagtatccttct
gtcgaattcaaatggctggatgtaaaaggaccttttaaacgggcggtcgccttgcaaaag
ggcacagactactttggcaacaactcgttgttgtatttttgcgatgtcgatttagttttt
cgtcaagagtttgccgagagatgtcgagcaaacgccgtgattgggaaacgtgcgtatttt
cctgttatgtttagtcaattcaatccgaagataacgtttgcgaaacgtccgcatcccgga
cattactactatgccaaagaagcggggttttggcgctggtacagcttcggaccagtttgc
gcctatgccaaggatattaaagattccggtggcttaaacacgggacttataggctggggt
ttagaagatgtcgatttatatgagaagtttttgaagcggtcagacatcgagatctttcgg
gcacccgacctaggtcttgtgcatgtctatcaccagcacgcaagttgtgatccgcgatct
aatgaggaacagctggcagactgtcgaagggcacaggctgacatttatagttctgcatcg
tcctcggttgactatctacacgacaaagggtaccttgggtttttcctatga
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