Xenia sp. Carnegie-2017 (soft corals): 124453750
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Entry
124453750 CDS
T08024
Name
(RefSeq) THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Pathway
xen03013
Nucleocytoplasmic transport
xen03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124453750
09122 Translation
03013 Nucleocytoplasmic transport
124453750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xen03019
]
124453750
03041 Spliceosome [BR:
xen03041
]
124453750
Messenger RNA biogenesis [BR:
xen03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
124453750
Spliceosome [BR:
xen03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
124453750
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
RWD
Motif
Other DBs
NCBI-GeneID:
124453750
NCBI-ProteinID:
XP_046860559
LinkDB
All DBs
Position
Unknown
AA seq
702 aa
AA seq
DB search
MRSKRSRTSSDTSSSTTPPVKKLSKTNVTLDEDSKSTVVMVSSSASSISSEASETKSEPF
TGVERFRKACQKIKSLFEQMKAYKDNDKNGTELENLRMQCLLSFVTLKNCNRSAQFLNRQ
ARDDTLEAKQKVDGLHLELQNLLYEITHLKKEINKCLQFKSKDQEIDLISEEELKQELEK
MKDEKLSEDPHKLMLARLDWELKERKSLTAIKQSYVTKKKTMAHEIQEKNDFLNSLEPQL
KTILQATSPIQDFLGMQLESKRIKYQTAKFLPRPLYVLFVQSMAYQEACDPNLNTEIIGD
VEAAKAQLEDKAGIPGVVDVELDENVDKTEEDEVEVDELPKKRQHRRTTEELCQEEKVKT
ALKQHPLQVQLEITCKGDIKSKILFCYIPLLNIITVSLDILCSENEKLKFSGRSLLSPDS
VLTCLFPEDFGDVTPNPTNHHQLNKLGIENVTFGKLNIGRPYKWVQKLCGLEFPTSDSKS
NEIPTVNSSLSASHMERTVKSIKSRILTRILLTKQLISLESLSIPLSEEGRHLFPVKSLS
TLESWNVITTSEYSELPFVENKTLIESITENDMLFLATFSCENVKLKAAVIVPSDYPVRT
PLFKMAVSSNGSYVNNDYVRAIETEVNVFYEEMCKEDSRDNILSNQLRRVQMCFDVFNDT
NASEKHDMQNHEFLIMRVKRGRDRGMALEYDQKHACFVHRCK
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgcgatctaaaagatctcgtacatcttcggatacttcttcttcaacaacgcccccagtg
aaaaaacttagtaaaacaaatgtcacgctggatgaagattcaaaatctactgtagtaatg
gtcagttcaagtgctagcagcatctcgagcgaagcaagtgaaacaaagagtgagcctttc
acgggtgttgaacgatttaggaaagcttgtcaaaagattaaaagcttgtttgagcaaatg
aaagcttacaaggataatgataagaatggaactgaactggaaaatttacgaatgcaatgt
ctattatcatttgttaccttaaaaaactgcaaccggtctgctcaatttctcaacagacaa
gcacgagatgatacactagaggcaaaacaaaaagtagatggcttgcatctggagcttcag
aacttgctatatgagataacacatttaaagaaggagatcaataaatgtttacaatttaag
tccaaagaccaggagattgatttaatatctgaagaagagttaaagcaagaactagaaaaa
atgaaagacgagaagctttctgaggatcctcacaagcttatgttggcccggcttgattgg
gaactaaaagaaagaaaaagtttaactgcgatcaagcaaagttatgtgacaaagaagaaa
acaatggctcatgaaatacaggaaaagaatgattttttaaatagtcttgagccacagctg
aagacaattctccaggcaacatctccaatacaagattttctgggaatgcaactggaaagc
aagagaataaaatatcagactgcaaagtttttaccaaggccattgtatgtgttgtttgtg
caatctatggcctatcaagaagcatgtgatcctaatctgaatactgagataattggtgac
gttgaagcagctaaagctcaattagaagacaaagcaggaattccaggtgttgtggatgtt
gagttggatgaaaatgtagataaaactgaagaagatgaagttgaagttgatgagctgccc
aagaaaaggcaacatagacgaactactgaggaactttgtcaagaggagaaagtcaagact
gctttaaaacaacatccattgcaggtgcagcttgaaattacgtgtaaaggtgatattaag
tcaaagatattgttctgttacattccgttattgaacattatcactgtttccctggacatt
ctgtgcagcgaaaacgaaaagctcaaattttctggaagatcattactttcccctgattct
gtattgacctgcctttttcctgaagattttggtgatgtcactcctaatcccaccaatcac
catcagcttaacaaattaggtatagaaaatgttacatttggtaaactgaacattggtcgt
ccctacaaatgggtgcaaaagctttgtggactagagttccctacatccgactcaaagtca
aacgagataccgaccgtgaattcctctctcagtgcatcgcacatggaaaggactgtgaaa
tctattaaatctagaattttgacgagaatattgttgacgaaacagttaatatcattagaa
tcactcagtataccgttaagcgaagaaggacgtcatcttttccctgtaaaaagtctcagt
acactagaatcgtggaatgtgatcacaacttcagaatattcggagttacctttcgtggaa
aataaaacgcttattgaatctatcacagaaaatgatatgctctttttggcgaccttttca
tgcgaaaatgttaaactgaaggcggctgtcatagttccatcagattatccagttcgaaca
ccgttattcaagatggctgtttccagcaatggttcttatgtgaacaatgattatgtcagg
gcaattgaaacagaggtcaatgttttttatgaagaaatgtgtaaagaagactcaagagat
aacattctttcgaatcaactaaggcgtgttcagatgtgttttgatgttttcaacgataca
aatgcttcagagaagcatgacatgcagaaccacgaatttttgatcatgcgagttaaacgg
ggtcgcgaccgtggcatggcgttggagtacgatcaaaaacacgcatgtttcgttcatcgt
tgtaaataa
DBGET
integrated database retrieval system
