Xenia sp. Carnegie-2017 (soft corals): 124454158
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Entry
124454158 CDS
T08024
Name
(RefSeq) opsin Rh6-like
KO
K04285
melatonin receptor type 1A
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Pathway
xen04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
124454158
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
xen04030
]
124454158
G protein-coupled receptors [BR:
xen04030
]
Rhodopsin family
Others
Melatonin
124454158
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7tm_4
Git3
7TM_GPCR_Srx
Motif
Other DBs
NCBI-GeneID:
124454158
NCBI-ProteinID:
XP_046860922
LinkDB
All DBs
Position
Unknown
AA seq
664 aa
AA seq
DB search
MISTNIILEFVALTLVFLAALFGNVTLFYVVGTNRNLRTRGNVFILNLAAADLLVAVVNL
PITITTVLADKWILGKTVCQISGFITLLTFVASCMALSMININRYHAIMQWQSYKKTYTK
RKCLLYVGITWAITIVLSIPPFFGWARFDYDPGQSYCFAEWKASKSYTIFMIAACLCGPL
SIMTYCYVRINLYDKKFALGITSSPNGSENTRNTDPKACFKRRKKRLTRTILTLIFVFGV
CWSPFALIMIAQVFFNAHVPRYVDFGSLVLGYLNSFLNVIVYNATNRKIREKFKQAFHTA
LCKTPRVKYRIDPSSLSTGQSAFFQPYGSFGVYCFWTYPPTKMISTNIIFEFVALTLVFL
AALFGNVTLFYVVGTNRNLRTRGNVFILNLAAADLLVAVVNLPITMTTVLADKWILGKTV
CQISGFITLLTFVASCMALSMININRYHAIMQWQSYKKTYTKRKCLLYVGITWAITIVLS
IPPFFGWAKFDYDPGQSYCFAEWKASKSYTIFMIAACLCGPLSIMTYCYVRINLYDKKFA
LGITSSPSESENTRNTDPKACFKRRKKRLTRTILTLIFVFGVCWSPFALIMIAQVFFNAH
VPRYVDFGSLVLGYLNSFLNVIVYNATNRKIREKFKQALQIAICKKPRVKYRIDPSSLST
GQFL
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgatatcgaccaacataattttggaatttgtagccttgacgttagtttttcttgctgct
ctatttggcaatgtaacactattttatgttgttggaaccaatcgtaatcttcgtacaaga
ggaaacgtatttatacttaatcttgctgctgcagatttgttagttgctgtagtaaatctt
ccaataactatcaccacagtcttggctgataaatggattcttggtaaaacagtttgtcag
atatctggattcattactttactcacatttgttgcttcatgcatggcattgtctatgatc
aatatcaatcgctatcatgcaataatgcaatggcaatcctacaaaaaaacttacacgaaa
agaaaatgtttactatacgttggcatcacttgggccataacaatcgtattgtcaattccg
ccattttttggttgggcgagattcgactatgatccaggacagagttattgttttgctgaa
tggaaagcaagtaaatcgtacacgatctttatgattgcagcttgtctatgtggtccgtta
tctataatgacttactgttatgtaagaataaatctgtacgacaagaagtttgctttggga
atcacttcgtcgccaaacggaagtgaaaatacaagaaatacagatccaaaagcatgcttt
aagaggagaaagaaaaggttgacaagaacaattttaactttgattttcgtttttggagtt
tgttggtcgccatttgcgcttatcatgatagcccaggttttcttcaatgcgcatgtacca
cgttacgttgattttggctcgcttgttcttggatatttaaacagttttttaaatgtcatt
gtttataatgcaacaaacagaaaaatcagggaaaagttcaaacaagcatttcatacagca
ctatgcaaaacaccgcgagtcaaataccggattgatccgagctctttatcaacaggacaa
tcggctttcttccagccttacggatcttttggtgtttattgtttttggacttatcctcca
accaagatgatatcgacaaacataatttttgaatttgtagccttgacgttagtttttctt
gctgctctatttggcaatgtaacactattttatgttgttggaaccaatcgtaatcttcgt
acaagaggaaatgtatttatacttaatcttgctgctgcagatttgttagttgccgtagta
aatcttccaataactatgaccacagtcttggctgataaatggattcttggtaaaacagtt
tgtcagatatctggattcattactttactcacatttgttgcttcatgcatggcattgtct
atgatcaatatcaatcgctatcatgcaataatgcaatggcaatcctacaaaaaaacttac
acgaaaagaaaatgtttactatacgttggcatcacttgggccataacaatcgtattgtca
attcctccgttttttggttgggcgaaattcgactatgatccaggacagagttattgtttt
gctgaatggaaagcaagtaaatcgtacacgatctttatgattgcagcttgtctatgtggt
ccgttgtctataatgacttactgttatgtaagaataaatctatacgacaagaagtttgct
ttgggaatcacttcgtcgccaagcgaaagtgaaaacacaagaaatacagatccaaaagca
tgctttaaaaggagaaagaaaaggttgacaagaacaattttaactttgattttcgttttt
ggagtttgttggtcgccatttgcgcttatcatgatagcccaggttttcttcaatgcgcat
gtaccacgttacgttgattttggctcgcttgttcttggatatttaaacagctttttaaat
gtcattgtttataatgcaacaaacagaaaaatcagggaaaagttcaaacaagcacttcaa
atagcaatatgcaaaaaaccgcgagtcaaataccggattgacccgagctctttatcaaca
ggacaattcttgtaa
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