Xenia sp. Carnegie-2017 (soft corals): 124454248
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Entry
124454248 CDS
T08024
Name
(RefSeq) scaffold attachment factor B1-like
KO
K25092
scaffold attachment factor B
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xen03041
]
124454248
Spliceosome [BR:
xen03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
124454248
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
SAP
RRM_5
Motif
Other DBs
NCBI-GeneID:
124454248
NCBI-ProteinID:
XP_046861021
LinkDB
All DBs
Position
Unknown
AA seq
969 aa
AA seq
DB search
MSSIGGKKLTQLRVVDLRAELEKRGLDKTGLKGALVERLEKSLQEESIKSDKSEDAAVER
KDETAGTKASEEATQTPNGNLDDGPEVPEDFSGFIVLDGDDSEAEIDDDEEENVEEKISE
KSLEYELPCEDEVPEEINEKNETVDESVEEAAEDEQTKTEEEIKPNENQLSLSMCVNTDD
VQDDLDEDLKEIQKESPVAEDDLTKEDEALNFDELDNEMEAGDENNEEHIELTEETKEKD
EEMNEEVEDEEEEEDEKMEDDDVEEKEDALGEEQEKSEDVKEEETGGDSIALETKTTEDK
NDDSESNVHKKEELPEKSKVAGNEDEKKTEEKSDTKDDGKSDSVKADGETKKTATDAKKK
EPGKSLWVSNLSSMTRAADLKTRFSQHGKVVGAKIVTNSKVPGGQCFGLVTMSTSEEAAK
CIQHLHRTEMHGRNITVDRAKGDRLPITTSGAATKKTLGKKVAAKPAEDKEEKTAETKSE
DKPTDDKTGKESSAKSKAESGGKSAKPDSSKKDKHSRRRSSPAIKSLEDVRREKRERQQR
ERRERERRERLRRERERAIRVKVLERQRRERERERRRLQILREREESERQERLRLERERA
RQREMERERERERQERERMKIIQERQIREEREKLQRERERLERERLLRMERERLDRQRVE
ERRGVKRGADPYAREKSPARGPGFWPDSKRPAADRDVASREFFSGATHKDRSSRDLSDSR
APPGRERRGDVRAAHVDPRASHSSRDEARDEHRRAERATDGRSSRDRRGSWEHGTENGES
QKGLSMLLQRAGVTGVLGSDAGARSGLSKPIPQSAGGSSSRERMGESWHDRSGGRAVMSS
HSMAATGSSSSRVGRAMVSDAARGWPVEKERDRGRERARSMATREMSRSAWGTSASASMM
AQSVDRRTVIPPGRSSIIPPRMVSHHSGPGAMTVAVMDSRRAVAMSGRSDPFRGATMPSI
PRSGTMRRY
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcgatcggtgggaaaaaattgacccagttacgagttgttgatctaagggctgag
cttgagaaacgaggcttagataagaccggacttaaaggcgctctcgttgaacgtttggaa
aagtctttacaagaagaatcgatcaagtctgataaatctgaggatgcagcagttgaaagg
aaagatgaaacagctggaacgaaagcaagcgaagaagctactcagacgccaaacggaaat
ttagatgatggaccagaagttcctgaagatttctctggtttcattgtgttggatggtgat
gatagtgaagctgaaattgatgatgatgaagaagaaaatgtggaagaaaaaatttccgaa
aaatctctcgagtatgaacttccttgtgaagatgaggttcccgaagaaattaatgaaaaa
aacgaaaccgtcgacgaatcagtcgaagaagcggcggaggacgagcagacaaagactgaa
gaagaaattaaaccaaacgaaaatcaactgtcattatcaatgtgtgtcaacactgatgac
gttcaagatgatttggatgaagatcttaaagaaatacaaaaggagagtcctgttgcagaa
gatgacttaactaaagaagacgaagctttgaactttgatgaattggataacgagatggaa
gctggcgatgaaaataatgaagagcatattgaattaactgaagaaactaaggaaaaagat
gaagagatgaatgaagaagtggaagatgaagaagaagaggaagatgaaaagatggaagac
gatgatgtggaagaaaaagaggatgcattaggggaagagcaagaaaaatctgaagacgtg
aaagaagaggagaccgggggagactccattgctcttgaaacaaaaactactgaagataaa
aatgatgatagcgaatcaaatgttcacaagaaagaagaacttcctgagaaatccaaagtc
gcagggaatgaagacgaaaagaaaacagaggaaaagtcggacaccaaggacgatggtaaa
tccgattcagttaaagctgatggcgaaacaaagaaaactgcgacagatgctaagaagaag
gagcctgggaagagtttgtgggtcagtaatttatcttcaatgactcgtgccgctgacctc
aagacgcgattttcacagcacggaaaggtggttggtgcaaaaatcgtaacgaactcaaag
gttcctggcggtcagtgttttggtcttgttaccatgtcaacgagtgaggaggcagcgaaa
tgtattcaacatcttcatcggaccgaaatgcatggccgaaacatcacagttgacagggcc
aaaggggatcgtctaccaataacgacttctggagctgctacaaaaaaaaccttaggtaaa
aaagttgcggcgaaacctgctgaagataaagaagagaaaacagcggagactaagtctgag
gataaaccaacggatgataaaactggaaaagagagtagcgcaaaaagcaaagcagagagc
ggcggaaaatctgcaaaaccagacagttccaagaaagacaaacattcgcgtcgacgctca
agtccggctatcaaatcccttgaagacgtgagacgcgagaagcgagaacgtcaacaacgc
gaacgtagagaacgtgaacgtcgtgaacgcctacgtcgggaacgcgaacgtgctatacgc
gtgaaagtgttagagcgacaacgaagagaacgcgagagagaacgacgacgcctgcagata
ttgcgtgaaagagaagaaagtgaacgccaagagcgtcttaggctcgagcgtgaacgtgcc
cgtcaacgtgaaatggaacgtgaacgcgagagggaaagacaagaacgggaacgtatgaaa
atcattcaagagcggcagatacgtgaagaacgagaaaagttgcaacgcgaacgtgaaagg
ttggaacgtgaacgtcttctacgcatggaacgcgaacgacttgacagacaacgtgttgaa
gaacgtcgtggcgttaaaagaggagccgatccgtatgcacgtgagaaatctcccgctcgt
ggtcccggtttttggcctgatagcaagagacctgcagctgatagagatgttgcaagtcgg
gaattcttcagtggagcaacgcacaaggatcgcagcagccgtgatttgtctgattcaaga
gctcctcctggtagggaacgtcgtggtgatgttcgtgctgctcatgtagatcctcgtgct
agtcattcatcacgtgacgaggctcgtgatgaacacaggcgtgcggagagagcaactgat
ggcagatccagtcgtgaccggaggggaagctgggagcatggtactgaaaatggtgaatct
cagaaaggactctcaatgttgttacagcgtgctggtgtcacgggtgttcttggtagtgac
gcaggggctcgttctggtctatcaaaacccataccacaatctgctggaggttcttccagc
cgtgaaaggatgggggaaagttggcatgatcgtagtggtggtcgggctgtgatgtcatca
cacagcatggctgccactgggagttcttcctcgcgtgttggtcgcgcaatggtcagtgat
gctgcaaggggatggcctgtagagaaagagcgtgacagaggtcgggaacgtgctcgtagc
atggccactcgcgagatgtcacgttcagcatggggaacatctgcaagtgcatcaatgatg
gcgcaatctgtcgatcgtcgcacggtgattcccccaggtcgtagttccattatccctcca
agaatggtgagtcatcattctggtcctggagcaatgacagtcgctgttatggacagtcga
cgtgctgtggcaatgtctggacgaagtgatccttttcgaggtgcaaccatgccttccatc
ccgcgaagtggaacaatgagacgttactag
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