Xenia sp. Carnegie-2017 (soft corals): 124455482
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Entry
124455482 CDS
T08024
Name
(RefSeq) DNA polymerase delta catalytic subunit-like
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Pathway
xen03030
DNA replication
xen03410
Base excision repair
xen03420
Nucleotide excision repair
xen03430
Mismatch repair
xen03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
124455482
03410 Base excision repair
124455482
03420 Nucleotide excision repair
124455482
03430 Mismatch repair
124455482
03440 Homologous recombination
124455482
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xen03032
]
124455482
03400 DNA repair and recombination proteins [BR:
xen03400
]
124455482
Enzymes [BR:
xen01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
124455482
DNA replication proteins [BR:
xen03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
124455482
DNA repair and recombination proteins [BR:
xen03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
124455482
MMR (mismatch excision repair)
DNA polymerase delta complex
124455482
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
REV3_N
DNA_pol_B_2
DNA_pol_B_exo2
divDNApol
DZR
DUF6356
Motif
Other DBs
NCBI-GeneID:
124455482
NCBI-ProteinID:
XP_046862075
LinkDB
All DBs
Position
Unknown
AA seq
1073 aa
AA seq
DB search
MEQGGDKRKNDNGDNSSEDVHKRRKLNEVKPSGFERELAKLGIAENPTSKWRRPPLPVID
EANDNILFQQLDIDHYIGKPHPGMPGSKVGPVPIARMYGITMEGNSVLCHVHGFVPYFFV
PAPLHMKRDDCHLFKDALNKAVLKDMRSNKDNVTQAVLAVDIHLKESIYGYHGNRKIPFL
QITMALPKLVAPAKRLLEFGIRYDDNPERAYTTYESNVEFEVRFMVDTAVVGCNWIELPA
GKYHVRNSESGKISRCQLEVDIAWDDFISHPCEGEWQKIAPVRVLSFDIECAGRKGIFPE
PEKDQVIQIANMVIRQGEKDPFVRNVFTLETCASIIGSEVKSYMDEKHLLKEWSKFVSEV
DPDVITGYNIVNFDLPYLLNRALTLKLSDFSLLGRIKDDKSTVSTTTFQSRAYGKRENKV
INITGRVQFDLLHILLRDYKLRSYTLNSVSYHFLQEQKEDVPHSIITDLQNGNEQTRRRL
AVYCLKDALLPLRLLEKLMCIINYMEMSRVTGVPFSYLLSRGQQIKVVSQLLRKAQTQDL
VIPTQKIEPGEEYAGATVIEPSKGYYDSPIATLDFSSLYPSIMMAHNLCYTSLLNEHNIK
ELASDEYIKTPCGSYFIKPSKRKGILPEILEDLLGARKKAKLDLKNETDPFRKKVLDGRQ
LALKVSANSVYGFTGAQVGRLPCLQISSSVTAFGRMMIERTKELVEEKFTIANGYKHDAK
VIYGDTDSVMVKFGTETVAESMELGKEAASYVTSHFIQPIKLEFEKVYFPYLLISKKRYA
GLFFTKAETYDKMDCKGIETVRRDNAPLVASLINSCLQKILIDRDPMGAVEYTKQVISDL
LCNRIDISQLVITKELTKTGEEYSAKQAHSELAERMRKRDAGSAPKLGDRVPYVIIAGAK
GMAAYQKAEDPIYVLENNIPIDTSYYLENQLTNPLLRIFEPILGEDKAKSILFKGEHTRT
KTVIASSIGKLAFFAKKRSTCIGCKTVLDDDSAVCKHCKSQESMIYQKEIASLNYLEEKF
SRLWTQCQECQGSFHHDVLCTSRDCPIFYMRKKAKKDLVDQHKMVARFGNCSW
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atggaacaaggtggcgataagagaaagaatgacaatggtgataacagtagcgaggacgtc
cacaaacggagaaaattaaacgaggtcaaacccagtggatttgaacgagaattagcaaaa
cttggaatagccgagaatcctacatcaaaatggcgacgacctcccctgccggttatagat
gaagcaaatgataacattttgtttcaacaactagacatcgaccattacataggtaagcca
catcccgggatgcctggttctaaagttggtccagttcccatagctcgtatgtatggtata
acgatggaaggaaacagtgtcctctgtcatgttcatggctttgttccatacttctttgtt
cctgctcctttgcatatgaaaagggatgattgccatctattcaaagatgcactcaacaaa
gctgtgttgaaagatatgaggtcaaataaagacaatgtcacgcaggcagtgcttgctgtt
gatattcacctgaaggaaagtatctacggttatcatggaaacagaaagataccatttctc
caaatcacgatggctctaccgaagctggttgcaccagcaaaaagattgttagagtttggt
attagatatgacgacaatcctgagagagcttacacaacgtatgaaagtaatgttgaattc
gaggttcgttttatggttgatactgcagttgttggttgtaactggatcgaacttcctgct
gggaaatatcacgtgagaaattcagaatctggaaagatttcaagatgtcagttggaagtc
gatattgcttgggacgatttcattagtcatccttgtgaaggagagtggcaaaagattgca
cctgtgcgcgtacttagttttgatattgaatgcgctggtcgcaaaggaatttttcccgag
cccgaaaaggatcaagttattcagatagccaacatggtcatacggcagggagagaaagat
cccttcgttagaaatgtattcacgcttgaaacgtgtgcctcaatcattggatccgaagtg
aaatcgtacatggacgagaagcatttgctcaaggaatggtcgaaatttgtcagcgaagtt
gatcctgacgtcataaccggctacaacattgtgaactttgaccttccttatttacttaat
cgtgcgttgacgcttaagctgtcggacttctcgttattgggaaggattaaagatgataaa
agtacggtatcgaccaccacgttccagtcacgtgcttacggaaagcgagaaaataaagtc
atcaacataactggccgtgtgcagttcgatcttttacatatattgctgagagactataag
cttcgatcgtatacgttgaactctgtgagctatcacttcttgcaggagcagaaagaagat
gtcccacattcgataatcacagatttacagaatggaaacgaacagacccgtcgaaggctg
gctgtatactgcctgaaggatgccctacttcctctacgacttttagagaaactcatgtgc
attatcaattacatggagatgtcacgtgtgactggtgtacccttcagttatctactttca
agagggcagcagatcaaagtcgtttctcagctgttgcgtaaagctcaaactcaagatttg
gtcattcctacccagaagatagagcctggggaagaatatgcgggtgccacagttatagaa
ccttcgaaaggatattatgattcacctattgcaactttggatttctcgtctttatatcct
tcaatcatgatggctcacaatttatgttatacaagtttacttaatgaacataacatcaaa
gaacttgcatctgatgaatatatcaaaacaccatgtggatcttattttatcaaaccgtca
aaaagaaagggaatcttaccagaaatcctcgaggatttgttgggagcaagaaagaaggcg
aaactagatttaaaaaatgaaacggacccatttcgaaaaaaggtacttgacggtcgccag
ttggctttgaaagtgagcgctaattctgtttacggttttactggtgctcaagttggtaga
ctaccttgtctgcaaatttcgtcgagtgttacagcttttggaagaatgatgattgaaaga
acgaaagaattggttgaagaaaagtttacgatagctaatggttataaacatgatgccaag
gttatttatggtgacacagactctgttatggtaaaatttggcacggaaactgttgcagaa
agtatggagcttggaaaagaagctgcttcgtacgtcacgtcacattttattcaaccaatc
aaacttgagtttgaaaaagtgtatttcccgtatcttctcatcagcaaaaagcgctatgca
ggattgtttttcacaaaggccgaaacatatgataaaatggactgcaaggggatagaaacg
gtcagacgtgataacgcgccgttggtggccagtcttataaacagctgtttacaaaaaatc
ttaattgacagagacccgatgggtgcagttgagtacaccaaacaagttatatcagatcta
ctgtgcaaccgtatagatatatcacaattggtcattactaaagaactaaccaaaacaggt
gaagaatactcggctaagcaagcccattctgagttggccgaaagaatgaggaaaagagac
gcgggatcagcaccaaagttgggtgatcgtgtcccttacgttattattgctggagctaaa
ggaatggctgcttatcaaaaagctgaggatcctatttacgtactagaaaacaacataccc
atcgatacgagttattatcttgaaaatcagttgaccaatcctctgttgaggatatttgag
cctattcttggcgaagataaagcaaaatcgattttgttcaagggagaacacacaagaacg
aagacagttatagcttcaagtattggcaagttggcattttttgccaaaaaacgcagcact
tgcattggatgtaaaactgtgctagacgatgacagtgcggtttgcaaacactgtaaaagc
caagagtcgatgatttatcaaaaagagattgccagcttgaattatttggaggagaaattc
tcccgactttggacacaatgtcaggaatgtcaaggaagctttcatcacgatgttctttgt
acgagtcgagattgtcctatattctacatgagaaaaaaggctaaaaaagacttggtagat
cagcataaaatggtggcaagatttggaaattgctcctggtga
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integrated database retrieval system
