Xenia sp. Carnegie-2017 (soft corals): 124455929
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Entry
124455929 CDS
T08024
Name
(RefSeq) DNA polymerase subunit gamma-1-like
KO
K02332
DNA polymerase gamma 1 [EC:
2.7.7.7
]
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Pathway
xen03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
124455929
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xen03032
]
124455929
03029 Mitochondrial biogenesis [BR:
xen03029
]
124455929
Enzymes [BR:
xen01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
124455929
DNA replication proteins [BR:
xen03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase gamma complex (mitochondrial)
124455929
Mitochondrial biogenesis [BR:
xen03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA polymerase
124455929
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNApol_Exo
DNA_pol_A
PPV_E2_C
Motif
Other DBs
NCBI-GeneID:
124455929
NCBI-ProteinID:
XP_046862501
LinkDB
All DBs
Position
Unknown
AA seq
1173 aa
AA seq
DB search
MNKMSRLSQLFGFLNNVKTIQVNCLNNGSKVRCLSTTWAWRSGETRYNLLDIQMLSKSLH
EQIFGECDDVQDSESIRKSIEHLSDHDLYGRSKNHIADVRFKLPKLKGANIAEHFEIIAK
EQSTNYFEMAQRLSRMSLPPRPTEWNFEPGWTKYELRENSIHAITVECPEGEVMVFDVEV
CVNEGQFPTLAVLATPDSWYSWVSHRLVQEQSYQWFLHPKMDDLIPFHLSGTCPETDWQE
QLVIGHSVGYDRSFIREQYLIKGSKMYFLDTLSLHMCISGLTGLQRNLMKASNVGKAEEE
DWMDVGCLNNLRDVHQLYCGGKELEKEKRNIFIHGTLDDVKRNFQDLMTYCSDDVLSTHE
VFCCVWPLYQERFPHPVSFAGMLEMSVAYLPVNQSWEKYIADCEDTYEDLEREMKSSLMR
LADNACHLLHNEKYKNDLWLWDLDWSVQDVRIKKMKPPKKGRKGRLPAEQEIRPSNGKKE
DELEEDIDIEDIISRIPPVEDVLYKKRQHLPGYPLWYRKLCPRADSDDWSRGSILVSAQC
RVGPSLLRMSWDGFPLYYHARHGWGYLVPGRTSNLVENDMQRSFPLRAFQELWQRLKNVN
GHRSTGAIDAPPEDGENVQDLCEGELWSSVEENELKKQVLGRTTSPKSRISRKRDTPDFH
HGVGPFNDVDLPGVWFFRIPHKNGEKFKCGNPLAKDYIGKMEDGTLKSEGDESAERTLVL
NKMISFWRNAKQRIMSQLYVWLEKDDLPVNVVKSQGYSSDEQYGAILPRLITAGTVTRRA
VEPTWMTASNPRADRVGSELKALIRAPPGYCFVGADVDSQELWIAALLGDANFARTHGST
AFGWMTLQGKKSEGTDLHSKTADTIGITREHAKVFNYGRIYGAGITFAEKLLLQFNHRLT
ENEARSKAEKLYAATKGIQRHRLSDYGMRIAIKYKYDSFVTDDGFMDSKIYYELLRKSRR
FRDHGEVMSLYKEWQKGSESQMFNKLENIAQSEQPSTPVLGCKISRALEPNIVRNKFITS
RINWVVQSSAVDYLHLMLVCMKWLFTECNIDGRFCISIHDEVRYLVNEEDRFRAALALQI
TNLLTRSMFSYKLGIRDLPQSVAFFSAVDIDSVIRKEVTLDCKTPSNPRGFTENHGIPRG
EALNIYEILQRTNNGSLKKQTFFFDKNDAEDAL
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaatgtcaagactgtcgcaattatttggtttcttgaacaatgtcaaaactata
caggtaaattgtcttaataacggctccaaagttcgttgtctatccacgacgtgggcatgg
cgatcgggcgaaactcgctacaacctgctggatatacaaatgctctcaaaatctctacac
gaacaaatatttggcgagtgcgacgacgtccaggattccgaatcgatccgaaagagcatc
gaacacctttccgatcacgatctttatggacggtcgaaaaatcatatcgcagatgttcga
tttaagctcccgaagctgaaaggtgcaaacattgctgaacattttgaaatcattgcaaaa
gagcagagtactaactactttgaaatggcgcaaaggttgtcgagaatgagcctacccccc
cgaccgacggaatggaattttgaaccaggctggacaaagtacgaactgagagagaactcg
atacatgctattactgtagaatgtcccgagggagaagttatggtgtttgatgttgaagtt
tgtgtaaatgaaggacagttcccaacattagctgtccttgctacacctgatagctggtac
tcctgggttagtcatcgtcttgtacaagagcaaagctatcaatggtttttacatcccaag
atggacgatctgattccttttcacttgtcaggaacatgcccagagacggactggcaagaa
cagcttgtcattggtcattcagttggatatgaccgcagttttatcagggagcagtattta
atcaagggctcgaagatgtatttcctcgacactctaagtttgcacatgtgcatctctggg
ctaaccgggttgcagcgcaatctgatgaaggcgtccaacgtgggcaaggccgaagaagaa
gattggatggacgtcggctgtctaaataatcttcgagatgtccatcagttgtattgtggc
ggaaaagaactcgaaaaagaaaagaggaatatatttattcatggtactcttgatgatgtc
aagcgaaactttcaggatctaatgacttactgctcggacgacgttctctcaactcatgaa
gttttctgttgtgtgtggccgctttatcaagagcgctttcctcacccagtaagctttgcg
ggcatgctggagatgagcgttgcctacttgccagtgaatcagagctgggagaaatacatt
gcagactgtgaggacacgtacgaggaccttgagagagaaatgaaaagctcgttgatgcga
ctcgccgacaacgcctgccatcttctacacaacgagaagtacaagaatgatctttggctc
tgggatcttgattggtccgttcaagatgtccgcattaaaaagatgaagccaccgaagaag
ggaagaaagggaagacttccagctgaacaggaaataagaccaagcaacggaaagaaagag
gacgaacttgaggaagacattgatattgaagatattatatctcgtatacctccggttgaa
gatgttctgtataagaaaaggcagcatttacctggctatccactatggtataggaaattg
tgtccgagggcagactcggatgactggagccgtggatcaattctagtcagtgctcagtgt
cgtgttggcccgagtcttttgcgcatgagttgggacggctttccgctgtactatcatgcg
cgtcatggttggggatacctggtccccgggagaaccagcaaccttgtggaaaatgacatg
cagagaagttttccattgagggcatttcaagaactttggcagcgtttgaagaatgtcaac
ggtcatcggagtacgggtgctattgatgctcctcccgaagatggcgaaaatgtccaggat
ttgtgtgaaggcgaactttggagctccgttgaagagaatgagttgaaaaaacaagtgtta
ggcagaactacatcgcccaaaagtagaatctctcggaagcgtgatacgcctgattttcat
cacggtgtcggaccttttaatgacgtcgatcttcccggtgtgtggttttttcgcatccct
cataagaacggggaaaaatttaaatgcggtaacccacttgccaaggactacattggcaaa
atggaagatggaacattgaaatctgagggggatgaaagtgccgaacggactttggttctc
aacaaaatgatttcattttggagaaacgcaaaacaaaggatcatgtcgcaattgtatgtt
tggttggagaaagacgatcttccagttaatgtggtgaaatcacaaggttattcttcggat
gagcaatatggtgcgatattacccaggttgattactgccggtacagtaacacgtcgggca
gtcgagccaacatggatgacagccagcaatccgagggctgaccgcgttggatcagaactg
aaagcgctcatacgtgctccgccaggatactgctttgttggggcggatgtcgacagccaa
gagttgtggattgccgctttattgggtgatgcaaacttcgccagaacacatggaagtacg
gcgtttgggtggatgacgctacagggtaaaaaatctgagggaaccgatcttcacagcaaa
actgcagacaccattggaataacacgagaacatgcgaaggtttttaactacggacggatt
tacggcgctgggattacttttgccgagaaattacttctgcaattcaatcatcgtctcacg
gaaaacgaagccaggagcaaagccgaaaaactttatgctgccaccaaagggattcaaagg
catcggttgtctgattatggtatgaggattgctatcaagtataaatatgacagtttcgtc
accgacgacggtttcatggacagtaaaatttactacgagctgctgaggaagtctcgaaga
ttcagagatcacggcgaggtgatgagtttgtacaaggaatggcaaaaaggaagcgaatct
cagatgttcaacaagctggagaatattgcgcaatcagaacaaccgtccaccccagttctt
ggctgtaagatcagtagagcactggaaccgaacatcgtcaggaacaagttcatcacaagt
cgtattaattgggttgttcagtcgtcggctgttgattatcttcatctgatgttggtctgt
atgaaatggctcttcaccgaatgcaacatcgatggtcgattttgcatcagtattcatgat
gaggttcgttacttggtgaacgaagaagatcgttttagggctgctcttgctctgcagatc
acaaacttattgacaagatcgatgttttcctacaagctggggattcgtgatttgccacaa
tcagtcgcattcttcagcgctgtcgatattgattcggtgattcgaaaggaagtaacgctg
gattgcaaaactccgtccaatcctcgtggcttcacggaaaaccacggaattccacgagga
gaggcactgaatatctatgaaatacttcaacggacaaataacggttctttaaaaaagcaa
acatttttctttgataaaaatgacgcggaagatgctctttga
DBGET
integrated database retrieval system
