Xenia sp. Carnegie-2017 (soft corals): 124456754
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Entry
124456754 CDS
T08024
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1-like isoform X1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xen04040
]
124456754
Ion channels [BR:
xen04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
124456754
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank_4
Ank_3
Ank
Ank_5
Ion_trans
ANIS5_cation-bd
CENP-F_leu_zip
Motif
Other DBs
NCBI-GeneID:
124456754
NCBI-ProteinID:
XP_046863056
LinkDB
All DBs
Position
Unknown
AA seq
1064 aa
AA seq
DB search
MGKEKASGKKENEDALLMHPSLPDIAKVFPITENDLKRNFSENNKKHQMLIQAITRKDVR
SLSTLFERLCSSKYEKCKMLLICGKLTNVRKFADTHLIEFAMHRDLECFKFLLNLFEDLK
KTFKVLQRSNKLDNNEYDSLLVYPFRIGQERQNLLHAMRFATDPLKILVLLSKCSVFNNL
INAKDDKKRTPLMKNIYSYCCNIDIPMKMVECGAYIDSIDCNNTSPLYQAVTTGNIQLVQ
KMTSVGKVETNDSEVLLRTSLYCNKSVFYPAVKSCNLEMLKWLYNKVSNSFGVLLKELKE
NIDELEIVIVNNNLVGILGFLVRIANESTEGIKLRKVLCSICFSAVVLNKIDLVKTFFDV
KYAKKVFSWCASGRNVFFYAVENYAMLERLLVAAKEKLDHKKIPKILDETDNTNCSVLHF
AALANQGEAFSTLVKFGVEFHPDRDMQVPINYILACLEGLPRENEHVLPIIREAVKLYCG
TIFSAKSEYVHDCLMHLVENGMVDIVKYLMELDLPIDLKKRDRNGNTLLHAATSSNSLAM
VNLLLDIEPGLLIIANDESKTPIVNAVFSTNVDVLKILLEHKSVLFGVKDLVHLLMCAKE
KTTFTNSIVDFAFKYYGSTGLVRILSEITSSDGRLLSQFNEESVAHILDKYINYPEYDFS
LFKSAENNVPDFEFFMKNRKYEKIFGHPLVEAFIQTTLQSNSAKTAYYFLASVNLIFFLL
LTTFVGLFLQGVRDMKSPGMITLASIIFLFCVINLAKEVLQICNDRKLYFLRDGIRNAME
LALYICTIIFVLPLHRFKYTYQIGAGGISVFLAWINFIWFLKNAPVFGTYVILIKRVFQS
LLKIFPVVCLLVGAFSMTFMLLKMDDEAFRSLPLSAMTTLIMMNGEIEYREQFMRSNSSL
FIMQSALLLIFFLVMGVVVMNVFIGLAVGDTDEMMKRSRIEKYLHKARMFIEFNKTLAKL
PRLLRPEQTTKAKFVKPFKGQKIFDENGMETKMNDLISETTNLKNNAKNLRNNVLDAQSN
VKKLENIVMDVKSDVKCMHNEIQELKDKIVLLTTILAGNKQSQG
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atggggaaagaaaaagccagtgggaaaaaggaaaatgaagatgctcttttgatgcatcct
tctttgcctgacatcgccaaagtatttccaataacagaaaacgatttaaagcgaaatttt
tctgaaaataataaaaagcatcaaatgctcattcaagcaataacaagaaaggacgtgaga
agcttaagtaccttatttgaaagattatgttcaagcaagtacgaaaagtgcaaaatgctt
ctaatatgtggtaaattgaccaatgtgcgcaagttcgcggatactcatctaatagaattt
gctatgcatcgcgacctcgagtgctttaagtttctcctcaatctttttgaagatttaaaa
aaaacattcaaagtgttgcagcgatcaaataaattggacaataatgaatacgattcctta
cttgtatacccattccgcattggtcaagaaaggcaaaatttattacatgcaatgagattt
gcaacagatcctttaaaaatattggttttactcagcaaatgctcggtctttaataattta
ataaatgcaaaggatgataaaaagagaacaccacttatgaaaaacatatatagctattgc
tgcaacatagatattcccatgaaaatggtcgaatgtggagcctacatagattcaatcgac
tgtaataacacttctccgttatatcaagctgtcactacaggaaacattcagctcgtgcag
aaaatgaccagtgttgggaaagtagaaacaaatgacagtgaagtgctacttagaacatcc
ctgtactgcaataaatcagtattctaccctgcagttaagagctgtaacttggaaatgctg
aaatggctttacaacaaagtatcaaattcatttggtgttttgttaaaagagctaaaagaa
aacatagatgaactcgagatcgtgattgttaacaacaacttggttggcatcctagggttt
ttagtaaggatagccaatgaatctacagaaggaattaaactacgtaaagtactctgttca
atatgtttcagtgctgttgtcttgaacaaaattgatttagtgaagactttttttgacgtt
aagtatgcaaaaaaagtattctcatggtgtgcttctggaaggaatgtttttttctatgcc
gtagaaaattatgctatgttagaacgtctcttggttgctgctaaagaaaaactagatcac
aaaaaaataccaaaaattcttgatgaaacagacaataccaattgttcagttcttcatttt
gcagctttggctaatcaaggagaggccttttctactcttgttaaattcggcgttgaattt
catccagatcgtgacatgcaagtaccaataaactacattttggcatgcttagaaggactt
cctcgtgaaaacgaacacgtacttcctatcataagagaagcagtaaaactgtattgtggc
accatattctctgcaaagtctgagtatgtacatgactgtttgatgcatttagtcgaaaac
ggtatggttgatattgtaaaatacctgatggaattagatttgccaattgacctgaagaaa
agggacaggaatggcaataccttacttcatgctgcaacctcttcaaattccttggctatg
gtaaatcttctccttgacattgaaccaggcttgctgattattgcaaatgatgagagcaag
acccctattgtaaatgcagtgttcagtacaaatgttgatgtcttaaaaattttactggag
cataaatcagttctttttggagtaaaagacctagtgcatttgttgatgtgtgctaaagaa
aaaactacatttacgaactcaattgtggacttcgcttttaaatattatggatcgacagga
ctagttcgtattttgtcagagataacatcaagtgacggacgtttgctttctcagttcaac
gaagagtcagttgctcacattttggacaaatacattaattatcctgaatacgatttctct
ctctttaaatctgcagaaaataatgtcccggacttcgaattctttatgaagaacagaaaa
tacgaaaaaatttttggtcatcctttggtcgaagcatttatccagacaactctgcagtcc
aatagtgcaaaaactgcttactattttctggcatcggttaatttgatatttttccttcta
ctcaccacatttgttggattgtttttacaaggagttcgagatatgaagtcgcctgggatg
attactttagcatccataatatttcttttctgtgtaatcaacttggcaaaagaagtatta
cagatttgcaatgaccgaaagctttacttccttagggatggcatacgaaacgcaatggaa
ttggctttgtacatttgcacaatcatatttgttctacctcttcatagatttaaatatact
tatcaaattggagctggtggaatttcagtctttctagcatggatcaacttcatctggttt
ttaaagaatgcaccagtgtttggaacttatgttatcttaataaaaagagtatttcagtca
ctgttgaagatttttcctgtggtttgcttattggttggtgctttttccatgacatttatg
ctgttaaagatggacgacgaagctttccgttcactacctttgtcagctatgacgacatta
ataatgatgaatggcgaaattgagtacagagaacagttcatgagaagcaattcatctctt
tttatcatgcaatctgcccttcttcttatcttttttcttgtcatgggtgttgttgtcatg
aatgtatttattggtctcgcagttggtgatacagatgaaatgatgaaaagaagcaggatt
gagaaatatcttcacaaggctaggatgttcattgagtttaacaagacgttagcaaaattg
ccaagactgttacgtccagagcagacgactaaagcaaaattcgttaagccttttaaaggc
caaaaaatatttgatgaaaatggaatggagacaaaaatgaacgatttaatatccgagaca
acaaacttaaagaacaatgcaaagaaccttagaaataatgtattggacgcacagagtaat
gttaagaagctggagaatattgtaatggacgtaaagagtgatgttaagtgtatgcacaac
gaaatacaagaattaaaagataaaatcgtcttgctaacaacgattctggcaggaaataag
caaagccaagggtag
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