Xenia sp. Carnegie-2017 (soft corals): 124457027
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Entry
124457027 CDS
T08024
Name
(RefSeq) ATP-dependent RNA helicase DDX3X-like
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xen03019
]
124457027
03041 Spliceosome [BR:
xen03041
]
124457027
03036 Chromosome and associated proteins [BR:
xen03036
]
124457027
Enzymes [BR:
xen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124457027
Messenger RNA biogenesis [BR:
xen03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
124457027
mRNA cycle factors
Common to processing body (P body) and stress granule
124457027
Spliceosome [BR:
xen03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
124457027
Chromosome and associated proteins [BR:
xen03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
124457027
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
124457027
NCBI-ProteinID:
XP_046863283
LinkDB
All DBs
Position
Unknown
AA seq
544 aa
AA seq
DB search
MSYGAPENNRSQDRQFAGLDLKAGDLQSRNAGTQRTSQSTYIPPHLRGGGGGTQQRSAEF
FSRDSYYGGRSGERGYSPSNSYGNSYGGGSYGYNQYNNFGGINRNNYGGGYGKRGSGYRD
RNYDSPKDPWMSLPSAEDWGKLLPPNERLERELYAGCNTGINFDKYEDIPVEATGDKCPD
HIENFSDCSKLGEVITHNIELCQYSKPTPVQKYAIPIITGYRDLMACAQTGSGKTAAFLI
PILSRIFEDGPPSPPDMKHLGRRKQFPIGLILAPTRELAIQILDEAKKFAYRSHVRPAVV
YGGADVGQQMRDLDRGCHLLVATPGRLVDMLDRGKIGLDVCKFLVLDEADRMLDMGFEHQ
IRRIVEKDSMPKTGQRQTLMFSATFPKEIQVLARDFLDNYIFLAVGRVGSTSENITQKVV
WVDDVDKRSFLLDLLNASGPDSLTLVFVETKKGADALEDYLYREKYPATSIHGDRSQRER
EDSLQSFRSGRTPILVATAVAARGLDIPHVKHVINFDMPSDIEEYVHRIGRTGRVGTHAP
SSVL
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgagttatggagccccagaaaataatcgaagtcaagatcggcaatttgctggcctagac
ttgaaagccggtgatctgcaaagtcggaacgctggcactcaaaggacttcacaaagcact
tacatccctcctcatcttcgtggaggaggtggaggcacacaacaacgttcagctgaattt
tttagcagagacagctattacggaggaagaagtggtgaaagaggttattcccctagcaat
agttatggcaacagttacggtgggggaagttatggatataatcaatacaataactttggt
ggcattaatagaaataactatggcggtggttatggaaaacgtggtagtggttatagggac
agaaattacgactctcccaaagatccttggatgtcgttgccctctgcggaagattggggc
aagctattaccacccaatgaacgcttggaaagagagctgtatgctggctgcaacaccggt
atcaattttgacaaatacgaagatattcccgtggaggcgaccggagataaatgcccagat
catattgaaaatttctctgattgctccaaactgggagaagttataactcacaatattgaa
ctgtgtcaatattccaagccaacaccggttcaaaaatatgccataccgatcatcactgga
tatcgtgacttgatggcctgcgctcagacaggatctggaaagactgctgcattccttatt
ccgattttgagtcgaatttttgaagatggacctccgtccccccctgacatgaagcatctt
ggtcgacgaaagcagtttcctatcggtcttattcttgctccgacccgtgaattagccatt
caaattctcgatgaagcaaaaaagtttgcgtatagatctcacgtacgtcctgccgtcgtc
tacggcggagctgatgttggccaacaaatgcgtgatcttgaccgcggttgtcatcttctt
gttgccacccctggacgtctggtggacatgttggatcgtggcaagattggcttggatgtt
tgcaagttcttggttttggatgaagcagatcgcatgttggacatgggatttgaacaccaa
attcgtagaattgtcgagaaggactcgatgccaaaaacaggccaaaggcaaaccctcatg
tttagtgctacatttccaaaggaaattcaggtacttgcacgtgatttcttagacaactac
attttcttggctgttggacgtgttggttcaacaagcgaaaatatcactcaaaaggtcgtt
tgggtcgatgatgttgacaagagatctttcttgttggaccttctcaatgcttctggtcct
gactcattgacgttggtgttcgtggagacgaagaaaggagcggatgcattggaagattac
ttatatcgtgagaaatatcctgcaacgtccattcacggcgatcgctcccagcgtgagcgg
gaagattcactgcaatcatttcggagtggtagaactccaattcttgtggccactgcggtt
gcagctcgtggtctggacataccacatgtgaaacatgtgatcaactttgatatgcccagt
gatattgaggaatatgtccataggatcggtcgcacaggtcgtgtcggcacacatgcgcca
tcttcggttctataa
DBGET
integrated database retrieval system
