Xenia sp. Carnegie-2017 (soft corals): 124457701
Help
Entry
124457701 CDS
T08024
Name
(RefSeq) transcription elongation factor SPT6-like
KO
K11292
transcription elongation factor SPT6
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xen03021
]
124457701
03036 Chromosome and associated proteins [BR:
xen03036
]
124457701
Transcription machinery [BR:
xen03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
124457701
Chromosome and associated proteins [BR:
xen03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
124457701
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
Tex_central_region
S1
SPT6_acidic
SH2
Spt6_S1
Tex_YqgF
HHH_9
Tex_N
HHH_3
S1_RRP5
Motif
Other DBs
NCBI-GeneID:
124457701
NCBI-ProteinID:
XP_046863856
LinkDB
All DBs
Position
Unknown
AA seq
1503 aa
AA seq
DB search
MSDFFDSEEEESGEEIGSGSEEDVAEDEEIAQQEETTAIDDANDIINDDDSDGDEEDEGE
DNIRTRKRKDFHDAVDEEDLDLIEENLGINLDRRKYKRLKKLKPIDSDEEEDDRGSVGGH
SADEREALAHELFEDDEIEQLSRAISTTPVEPTNDQYAVLDDSESDVEDDFIVDDDNQPV
HERSRKKGGSRTQNRALQEAQDIFGLDFDFGDFEKFGQEEYSDEDRDEYEEEYSDEEGQQ
RRRGKKKTQKKTIFDVYEPSELKKIHLTDRDNEIRINDIPERHQLREVPMKAAEDKELTD
EAEWIYRHAFMTMPITNQEIQEGEKFIQTTLTKPPSAIPKIREALNLMRNKYFEVPFIAA
YRKEYVEPELNIEDLWRIWLFDEKWCQLSARKNNLKRLFEQMQTYQYNKLRENPDKPLDE
DERILEQDDVERLDAVQTMEELRDIYSHFVLHYGHEIPVMRLSRKKKSVNDADETVEEVE
MNDRLKIPKRRDFYTICREAGLGLFAKKFGLSPEQFGENLRDNYQRYETEQYPMEPREAA
EEHLSNMFLTTDAVLEGTRHMVAMQIARDPLVRQCVRQVFYERAKINISPTERGKKEIDR
DHECYSFKYIKNKPVSDLRGDIFLQMHKAKEEGLIQLDIGIDLDRGFHSYYDEAKQLYYR
DEFSNLVQMWNAQRTQALYRTFYQVLYPLFTKELEEKLLQEAKDFVVKCACRRLRSLVEV
APYQAEQHSDEEYDMFTGPRGLRVLSVAVPSDPYQPIFFVMLNGGGQVGDFLKLSFIMKK
RNSNRSKEKEKKEEDLESLKQFVLKKRPHVIVIATGSRDSLTVYEVVKISIRELEQENQI
SPINVELIDHEVAEIFEKSSRAETEFREYPMILRRAISVGRRIQDPLAEFAGLCVDEDEL
LCLRLHPKQNLISKDVLLKHLRIVFVTVVNEVGVDPNRILDFPHTSGLIQFICGLGPRKS
LALIKSLRKEGTKLENRSQLVTVCGMGPNGFLNTAGFVKIDTSALNDNTVNYIEVLDGSR
IHPETYEWARKMAVDALEYDETSEESNPSAALEEILESPERLRDLDLDAFAEELERQGFG
NKRITLYDIRDELFGRYKDRRPPYREMSVDDRFRLLTGETRETLFYGKLITCVVSGFAYR
KPNRERLENVDPKKDEETGLWQCPFCGNNTFADLGEVWTHFDNGSCPGQIVGARTRLENG
INGFVPTKLISDKHIKSPQERVKVGSMIHCRVTKIDAERFQVDLTCRTSDLEDREGKYSR
LKDTYFDQASEDKDKKAVKDAEKKANRPSYIKRVIVHPAFQNIAFKDAEKKLATSEQGEC
IVRPSNKGSDHLTVTWKVDEGIYQHIDIKEQGKENAFSLGKSLWIENEEFEDLDEIIARH
IQPMASFARDILSHKYYKDTEGGSINTMQEVLKAEKTKNPKRIPYFLSASKEFPGKFLLG
YMPRNKPRTEYVSVTPDGYRYRGRVHASLNALFKWFKEHFRDPVPEPRTMKAMMIYKKSL
CFI
NT seq
4512 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacttttttgatagtgaagaagaagagtctggagaagaaattggaagcggtagt
gaagaggatgtcgctgaagacgaagaaattgctcagcaagaagaaacgaccgccattgat
gatgccaacgatattataaatgacgatgacagtgacggtgatgaagaggatgaaggggaa
gacaacatacgaacccgcaagagaaaagattttcacgatgcagtggatgaggaggatctt
gatttaatcgaagagaatcttggaattaatttggatcgaagaaaatataagcgtttgaaa
aaactcaaaccaattgactctgatgaggaagaagatgacagaggatcagttggtggacac
agtgctgatgaacgtgaagcactagctcatgaactctttgaagatgatgaaattgagcaa
ctgtcgagagcaatatctaccacaccagtggagccaactaatgatcagtatgcagttctt
gatgactcagaatctgatgttgaagatgattttattgtggatgatgataaccaacctgtc
catgaaaggtctcgtaaaaaaggaggaagccgtactcaaaatagggcattgcaagaagcg
caagatatatttggtttggattttgattttggtgattttgagaaatttggtcaagaagaa
tattcagatgaggatcgtgatgagtacgaagaggaatatagtgatgaggagggacaacag
aggagacgagggaagaaaaaaacacaaaagaaaacaatctttgatgtatatgaaccaagt
gaacttaaaaagattcatctcactgatcgagacaatgaaatacgtattaacgacattcca
gaacgtcatcagttacgtgaagtaccaatgaaagcagcagaagataaggaactgaccgat
gaagcagagtggatataccgtcatgcatttatgacaatgccaatcacgaatcaagaaatc
caagaaggagagaaatttatccagacaacactaactaagcctccatcagctattcctaaa
atacgtgaagctcttaatctcatgagaaataagtactttgaggtcccatttattgctgct
tatcgtaaagaatatgttgaaccagaactgaatattgaagatttatggcgtatttggtta
tttgatgaaaagtggtgtcaattgagtgccagaaaaaataatttgaagcgactgttcgag
caaatgcaaacatatcaatacaataaattacgtgaaaatcctgataaaccattggatgaa
gatgagaggattctggaacaagatgatgttgaaagacttgacgccgtgcaaacaatggag
gaattacgagatatatactcacatttcgtcttacactatggtcatgagattccagtcatg
agattatcaagaaaaaagaaatcagtgaatgacgccgatgaaactgttgaagaagtggaa
atgaatgatagattgaaaatcccaaaacgacgtgatttctacacgatctgtcgggaggct
ggtcttggtttgttcgccaagaagtttggtttgtcacccgagcagtttggtgaaaatctt
cgggataattatcaacgttatgagaccgagcaatatcctatggagcccagggaggctgct
gaagaacatctctccaatatgttcttaacaaccgatgccgtacttgaaggtacacgtcac
atggttgccatgcaaattgcacgtgatccccttgtcagacaatgcgttcgacaagtcttc
tacgagcgtgctaaaatcaacatttcgcccacagagagagggaaaaaggagattgaccgt
gatcatgaatgttattcattcaaatacatcaaaaataaacctgtttctgatttacgagga
gatatttttcttcaaatgcacaaggcaaaggaggaaggccttattcaacttgatattggc
attgatttagatcgtggattccattcttattacgatgaagcaaagcaactctattatcgt
gatgagttcagtaacttggtgcagatgtggaacgcacagcgaacccaagctctttatcgg
acattttatcaagtactttatcccttgttcaccaaggaactcgaagagaaattattacaa
gaggccaaagattttgtcgtcaagtgcgcatgtcgtcgtctccgttcccttgttgaagtt
gcgccttatcaagcagaacaacatagtgatgaagagtatgatatgtttactggtcctcgt
ggccttcgtgttctctccgtagcagtaccttctgatccttaccaacctatcttctttgtc
atgttaaatggtggcggtcaagttggagattttttgaagttgagtttcataatgaagaag
agaaattcgaatagaagtaaagaaaaagaaaaaaaggaagaagatcttgagtcattgaag
cagttcgttttaaagaaacgaccccacgtgattgttatagctaccggaagtcgagattca
ttgactgtttatgaggtcgtgaagatatcaatcagggaactggaacaagagaatcaaata
tctccaattaatgttgaattaattgatcatgaagtcgccgaaatttttgagaaatcctca
agagccgagacggaattccgtgaatatccgatgatattacgacgtgctatttccgttggt
cgacgtattcaggacccacttgctgaatttgctggactttgtgtagacgaagacgaatta
ttatgtctgagacttcatccgaaacagaatttgatttctaaagatgtacttctgaaacac
ttgcgaattgtgtttgtcactgttgtcaatgaagtcggagtggatccaaatcggattttg
gatttccctcacacttctggtctgatacagtttatctgtggattgggaccaagaaaaagc
ttagctttaatcaagagtcttcgtaaggaaggaaccaaactcgaaaatcgttctcaactc
gtgactgtgtgtggcatgggacctaatggatttctcaatacggctggattcgtaaagatt
gatacgtctgcgctgaatgacaatacggtcaattacattgaagttttggatggctcaagg
attcatcctgaaacttatgaatgggcgaggaaaatggcggtcgatgctctcgaatatgac
gagacatcagaagagtcaaatccttctgccgctttagaagaaatcttggaaagtcctgaa
aggttgagagatctagatctagacgccttcgccgaggagctggaacgtcaggggtttggg
aacaagcgtatcactctttatgacatccgagatgaattgtttggacgttacaaagaccgc
agaccaccttatagggaaatgtccgttgatgatcgtttccgattgctaaccggggaaaca
cgagaaacgttgttctatgggaaactgattacgtgcgttgtatctgggtttgcataccgg
aaacccaacagagagagactggaaaacgttgaccccaaaaaggatgaagaaactggactc
tggcaatgtccattttgtggtaataatacgtttgcagaccttggtgaggtatggacacat
tttgataacggtagttgcccaggacagattgtcggtgctcgaacgagacttgaaaatgga
ataaacggttttgttccgactaaattgattagtgataagcacataaagtcaccacaagag
agagtaaaggttggttcaatgattcactgtcgtgttaccaaaattgatgccgaaagattc
caagttgatctcacatgtagaacttctgatttggaggaccgagaagggaagtacagtcgt
ctcaaagacacgtactttgaccaagccagtgaggacaaggacaagaaagctgtcaaagat
gcagaaaagaaagcaaacagacctagttacataaaaagagtgattgttcatcctgcgttt
caaaatatcgctttcaaagacgcagaaaagaaactggcaacaagtgagcaaggagagtgt
atcgtcagacccagtaataagggatctgatcatctgaccgtcacgtggaaggtagacgaa
ggaatctatcagcatatcgacattaaagaacaaggaaaggaaaatgcttttagtttgggc
aaatctttatggatcgaaaatgaggagtttgaagatttggacgagataattgctcgacac
attcagccaatggcatcctttgcacgtgacatactttcccataaatactacaaggacact
gaaggaggaagtatcaacacgatgcaggaggttctgaaagcagagaaaacaaaaaatccg
aaacgcattccatattttctctctgcgtcaaaggaatttccaggaaagtttcttctcgga
tatatgcctcgaaacaaacctcgtacagagtatgtctctgtgactcctgacggttacaga
tatcgtggtagagtacatgctagtcttaatgctcttttcaaatggttcaaagaacatttc
agggatccagtacctgagcccagaacaatgaaagcaatgatgatttacaaaaaatcttta
tgttttatttga
DBGET
integrated database retrieval system
