Xenia sp. Carnegie-2017 (soft corals): 124458424
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Entry
124458424 CDS
T08024
Name
(RefSeq) LOW QUALITY PROTEIN: DNA polymerase zeta catalytic subunit-like
KO
K02350
DNA polymerase zeta [EC:
2.7.7.7
]
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Pathway
xen03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
124458424
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xen03400
]
124458424
Enzymes [BR:
xen01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
124458424
DNA repair and recombination proteins [BR:
xen03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
B-family DNA polymerases
124458424
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
zf-C4pol
DNA_pol_B_exo1
Motif
Other DBs
NCBI-GeneID:
124458424
NCBI-ProteinID:
XP_046864392
LinkDB
All DBs
Position
Unknown
AA seq
1583 aa
AA seq
DB search
MEDFIHMKDKFTSLQNCEKNTLVKKNHSSYGNTPSFFFFLQNASADSINVSCEDCMINVD
KHELQRIEKSFDEPNFIEDNISLNDKVDKSCGKLSDFQITFIDENNVFLSCGDIVNKDVI
NSLETKTTKDHRVHSISSVLESLKTVNDNGFNDFVVEDCSRNVELDFEDDLFALTPNQTE
KNFDQYLEHVDHRSVCSESKSENLIDSPSESLCLTDEKHPLYSHYSDGCSSGSSMVLRLP
PDEESFKWNLDESFDGHQSSGTSNNLESPDSNTVPVVTEVSDLNLERTGECFSKNNVIKG
EEVVCDVSNMEISCDLHKKEHIKGAFVDNDVSYEISVDNNDCDQVSVDNDGFDQVSVNND
GCNEVSVDNDVHNQVYADNDGCNQVAVDNDGCRQVFEDSDGYNQLYVNKDSSYQVYKDQK
EPHSKIKKINLSQAEGSYELKIWKPTRMPPSPNYVKETRHIYNLPHVRHQKAFCSDSNDL
PLTTKVVGGRRLHLSSLSVKELPEFNLGGNFRTLRELQDQYVSKMDNGLLMDCLASESKI
SNFPQYKDIPGKLKIVLMGDRDVIITPVKLPPTRKDVEKWMLTKRPENERLNTSDIVSED
CEIPKNANFVNGETFVTEHRLLENSGGQSLQENEESQGNSGNILSCHVIGPKHSTPVVDC
ENKSHKVWHCTPIDHIKDKNNEESRKEKDLKLQNLRRNLLKNHEKDYPLPGAQQQTSLSE
GSYIEGPTPTNSFGFQISQPNIQDAKSLRQVQFLTLLSVELHVRTRRSLRPDPEFDVICA
IFYHIENETKDGKKYETGVIVTLREMTKIRNTNDDVCQSTSATDTTKTSHVKGNLQRHFC
NSKNLEVVTVEEETDVINYLVKIVHEKDPDILLGFEVQMLSWGYLIQRATTLGIDIASQL
SRVQDTSGTARFDAEIDKWGANHTSEITITGRIILNVWRLMKHEVTLNVYSFENVSYHVL
HERVPLYSYRQLTQWWDKKLPHDRWRTVEHYVIRCQGNIRILNQLDFVNRTSEFARLYGI
LFYSVISRGSQFRVESMMFRLTKPMNYISVSPSIQQRARMDAPECIPLVMEPESRFYVDP
VLVLDFQSLYPSMIIAYNYCYSTYLGKLARLNKIGHFEFGCTSLNVPPTLLEKLQDDIHV
SANGXCFVKSNIRRGILPRMLEEILDTRIMVKKAMKDCKDDKTLLQLLDARQLALKLIAN
VTYGYTSANFSGRMPCVEIADAIVRKARETLERAINLVNTRDDWGXVVYGDTDSLFVLVK
GASKEEAFKIGKEVVDAVTAKNPKPVKLKFEKAYMPCVLQTKKRYVGYMYETLEQKDPMF
DAKGIETVRRDTCPAVAKILEKSLRILFEERDVSLVKKFVQRQFVKMMKDRVSIQDFIFA
KEYRGMKRYKPKACVPALEIARRHLSRDRRAEPRVGERVPYVIVNGSPGLPLIQLVKDPI
DVLNDKNLRINTMYYVQKQILPPLDRVFSLIGVDVFSWYTQLPRYIPRHRKQKRSISRFF
TTLHCPVCEQLTQHGLCQSCRSNPQKSVFILASRVGNWERKYSHLKEICFQCCGARDEQL
SCTSLDCPVMFKLEKLKQIWNME
NT seq
4752 nt
NT seq
+upstream
nt +downstream
nt
atggaagattttatacatatgaaagataaatttacatcattgcaaaactgtgagaagaat
actttagttaagaaaaatcattctagttatggaaacacaccttcatttttcttctttcta
caaaacgcgtccgctgactctattaacgtatcttgtgaggattgtatgataaatgtggat
aagcatgaacttcaaaggattgagaaatcctttgatgaacctaactttattgaggataat
atctcactgaatgacaaggttgacaaatcatgtgggaaattaagcgattttcaaatcaca
tttatcgacgaaaataatgtatttttatcgtgcggtgatatcgtaaataaagatgttatc
aactctcttgaaacaaaaacaactaaagatcaccgtgttcacagtatatcttcagtattg
gagtcgttaaaaactgtcaacgataatggttttaatgattttgttgtggaagattgctcg
aggaatgttgaattggattttgaagatgatttgtttgccttaacaccaaaccaaactgaa
aagaattttgatcaatacttggaacatgttgatcacagatctgtgtgtagtgaatctaaa
agtgaaaatcttattgattcaccttcggaatctttgtgtttgaccgatgaaaaacatcct
ttgtacagtcattatagtgatgggtgctctagtggaagttctatggtgttaaggcttcca
ccagatgaggaaagctttaaatggaatcttgatgagtcatttgacggtcaccagtcctct
ggtacgagtaataacctcgaaagtcctgatagtaatacagttcctgttgttaccgaggtc
agtgacttaaatttagaaaggactggagaatgttttagtaagaataatgtaataaagggt
gaagaagttgtttgtgatgtttcaaacatggaaatatcgtgtgatttacacaagaaagaa
catattaaaggcgcttttgtggataatgatgtttcttatgaaatatctgtggacaataat
gattgtgaccaagtatctgtggataatgatggttttgatcaggtgtctgtgaataatgat
ggttgtaatgaagtatctgtggataatgatgttcataatcaagtatatgcggataatgat
ggttgtaatcaggtagctgtggataatgatggttgtcgtcaagtatttgaggatagtgat
ggttataatcaactatatgttaataaagatagttcttaccaagtatataaagaccaaaaa
gaaccccattcaaaaatcaaaaagatcaacttatcccaggcagaaggtagttatgaattg
aagatttggaaaccaacaaggatgcctccttcaccaaattatgttaaagaaacacgtcat
atctacaatctacctcatgttcgtcatcaaaaagcgttttgtagtgattccaatgattta
ccgttgacaacgaaggttgtcggtggacggcgtcttcatttgtcttcattatcggtaaaa
gagcttcctgaatttaatcttggcgggaacttcaggactttgagggaactccaagaccaa
tatgtatccaagatggacaacggtttactcatggactgtctagcttcagagagtaaaatt
agtaattttcctcaatataaggatatacctggaaaactaaagattgtcttaatgggagat
cgtgacgtgataatcactccagttaaactaccgccaacgaggaaagatgtcgagaaatgg
atgttgacaaaaaggcctgaaaatgaacgtttgaatacctctgatattgtttcagaggat
tgcgaaattccaaaaaatgcgaattttgttaatggagagacgtttgtgacagaacataga
ctgcttgaaaatagtggcggtcaaagtttacaagaaaatgaggaaagtcaaggaaattct
gggaacattctatcgtgtcacgtgattggtccaaaacacagtacacctgtagttgattgt
gaaaataaaagtcataaagtatggcattgtactcctatagatcatattaaagataagaat
aatgaagaatcccgcaaggaaaaagatttaaaactacaaaacctaaggagaaatttactc
aagaatcacgaaaaggactatccattacctggcgcacaacaacaaacatctctcagtgaa
ggatcttatattgaaggacctacaccaacaaatagttttggatttcaaatttctcaaccg
aatattcaagatgccaagtcccttcgccaggttcaatttctaactttgctgagtgtagaa
cttcatgtaagaacaaggagaagtttacgtcccgacccagagtttgacgttatttgtgca
atattttatcatattgaaaacgagacaaaagatgggaagaaatatgaaactggagtgata
gtaactctacgagagatgacgaaaattagaaatactaatgatgacgtatgtcagtctaca
agtgccacagacacgacaaaaacatcccatgtaaaaggaaacttacagcgtcatttttgt
aattcaaaaaatcttgaggttgtaacagtggaagaagaaactgatgttatcaattatttg
gttaaaattgtccatgaaaaagatcctgacatcttgctgggctttgaagttcaaatgttg
tcttggggatatcttatacaacgcgctacgactcttgggattgatatagcgtcacaatta
tctcgagtgcaggatacttccggtacggcgcggtttgatgcggaaattgacaagtgggga
gctaatcatacgtcagagattacaattacgggaagaattattttaaatgtttggcgactt
atgaaacacgaggtgactttgaatgtctactcgtttgagaatgtatcataccacgtactg
cacgaaagagtaccgctgtacagttatcgtcagctcacacaatggtgggataagaaacta
cctcatgatcgttggagaactgtggagcactacgtcattcgttgtcaaggcaacatcagg
attttgaatcagctcgacttcgttaacaggacaagtgagttcgcaaggctttatgggata
ctcttttacagtgtcatatcacgtggttcacagtttcgtgttgagtcgatgatgtttcgt
ctaacaaaaccaatgaattatatttctgtttcaccaagtatacagcagagagctagaatg
gatgcaccagaatgtatccctttggtcatggagcccgaatctcgtttctatgttgatccc
gttcttgtgttggattttcaatctctttatccctctatgatcatagcctataactattgt
tattccacttatcttggaaagcttgccagattaaataaaattggtcattttgagtttggt
tgtacatcgttgaatgttcctccaacattactggagaaactgcaagatgatattcatgta
agcgccaacggcntctgttttgtaaaatctaacataagacgaggaattttacccagaatg
ttagaggagatattagacacacgtattatggtaaagaaagctatgaaagattgtaaagat
gataaaactcttcttcaacttcttgatgctcgacaacttgctttaaagttgattgcaaat
gtcacttatggttacacatccgcaaacttctcaggacgaatgccttgtgttgagattgct
gacgccattgttcgtaaagcacgcgagactctggaacgagctatcaatctcgtgaacaca
agggatgactggggtnnggtcgtgtatggggacaccgatagtcttttcgtattagtaaaa
ggtgctagtaaagaggaagcgtttaagattggaaaagaagttgttgatgctgttactgca
aagaatcctaaacctgtgaaactaaagtttgaaaaggcatatatgccttgtgttcttcaa
acaaagaaacgttacgttggttatatgtacgaaacattagaacagaaagatccaatgttt
gatgcgaaaggaatagagactgtccggcgagatacatgtccagcggtcgctaagatttta
gagaagtctttaaggattttatttgaagaaagagacgtgagtcttgtgaagaagtttgtc
cagcggcagttcgttaaaatgatgaaagatagagtatcgattcaggatttcatctttgct
aaggaatatcgtggtatgaaaagatataaaccaaaagcatgtgttccagctttggaaatt
gcaagacgtcatttgtcacgtgatcgtcgcgcggaacctcgcgtgggagaacgtgtaccc
tacgtcattgttaacggcagtcctggactaccattgattcaattggttaaagatcctatt
gatgtgttaaatgataaaaatctacgtattaataccatgtactatgttcagaaacaaata
cttcctccattggatcgagttttttccttgattggagttgatgtgttttcatggtataca
caactaccccgctatatccctcgacatcgtaaacaaaaacgttcgatttctcggtttttt
acaactctacactgtcctgtatgtgaacaattaacacagcacggtttgtgtcaaagttgt
cgtagcaaccctcaaaaatctgtctttattctggcaagtagagtggggaactgggaaaga
aaatacagtcatcttaaagagatatgttttcagtgttgtggagctagagatgaacaactg
agctgtacatcactggattgtcctgttatgtttaaactagagaagttaaaacaaatatgg
aatatggaatga
DBGET
integrated database retrieval system
