Xenia sp. Carnegie-2017 (soft corals): 124459626
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Entry
124459626 CDS
T08024
Name
(RefSeq) cartilage oligomeric matrix protein-like isoform X1
KO
K04659
thrombospondin 2/3/4/5
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Pathway
xen04145
Phagosome
xen04512
ECM-receptor interaction
xen04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
124459626
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
124459626
09142 Cell motility
04820 Cytoskeleton in muscle cells
124459626
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xen04131
]
124459626
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xen04147
]
124459626
00536 Glycosaminoglycan binding proteins [BR:
xen00536
]
124459626
Membrane trafficking [BR:
xen04131
]
Endocytosis
Phagocytosis
Opsonins
124459626
Exosome [BR:
xen04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
124459626
Exosomal proteins of colorectal cancer cells
124459626
Exosomal proteins of bladder cancer cells
124459626
Glycosaminoglycan binding proteins [BR:
xen00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
124459626
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_3
TSP_C
EGF_CA
EGF_3
cEGF
EGF
DUF7630
Motif
Other DBs
NCBI-GeneID:
124459626
NCBI-ProteinID:
XP_046865051
LinkDB
All DBs
Position
Unknown
AA seq
968 aa
AA seq
DB search
MSVSFKMNKAIISITVLVGLLLAIKAVEIDLLDDFKINENIENVVSTEGLLFEGRAFTFG
EVKQNLVSRGKLAAEIAKQTKIYSGYTITANVKVQNEESALLWIETTYTRPVLGVWVNCN
NLGCSLTMLYLVHGRSYEVTFKNVGPINDNAWHKLVLHVTGVRRKNNPIPEASVYVDCAL
QGKVTLKRGYTSLLPFAKKKPTSAQIWFAQRSRGYRGGFERPWRGSLQNVKFVFNRDIEL
LTDQTVCSNLRDSRRKQYSPPFTETDTDSRKEDDKETTIISRPSFQGMAAQFSQMEIMLS
KQMLETQYLRRIIENLQFADSRVPSCKFEPCYPGVTCIDTPNKKPGYTCGQCPLGMEGDG
TNCTDIDECKLSPCFNGVKCTNSKQGYKCDSCPIGYRGGVVMGVGYEHARTKQVCRDINE
CLIPQKCAQFSKCINTLGSYRCSACADGYYGNPYVKCNGIRYCSGNVGSNPCNKNAYCIS
KYQGRSFECSCKVGYVGDGLFCGKDTDLDGVPDYALACTGPHCAKDNCRDYPNPDQSDID
GDGSGDACDNDIDGDGIPNSNDNCPRVPNGDQKDSDGDSVGDACDNCPRAPNEDQTDSDG
VGMGDACDPDNDNDGVINRRDNCPFVKNSDQSDVDKDNVGDKCDNCPLKFNPNQEDADYD
FLGDACDNDMDRDRDGIQDSVDNCQYIANAAQLDNDFDKRGDSCDADDDNDGIIDIHDNC
PLIANRYQRLSRSHGRGIECKYDYDGDSVKDKMDEGPQDASMTAVDFRKHVLFRVDGVVR
NDTNTWKVEQKGREVRKVEGTNNDILIGDKKFESVEFNTTIYVDGTSSSEAQMGLVFGFQ
NAKLFYLVMWEKSNSHTGLVIKEVKSTRGGSSELYSALRNTNNVYGQTNILWRSSDQTPW
ESFQAYKFLLTLSASRKRARISVYKGGEALFRTPELQTTYYRGGRIGMFSFNQSNVVWTA
LEVKCLGK
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgagttttaagatgaacaaagcaatcatttcaataaccgtcttggtgggattg
ttgctggcaatcaaagcagtagagatcgatctcttggacgacttcaaaataaatgaaaat
atcgagaacgttgtcagcacggaaggattgttattcgaaggaagagcgttcacctttggc
gaggtcaagcaaaacttagtcagtcgaggaaaactagccgcagaaatcgcgaaacaaact
aagatatattcaggttatacgataactgcgaatgtgaaagttcaaaatgaggaaagcgct
ttgctgtggatcgagaccacttatactcgaccggtgcttggagtttgggttaattgcaac
aacctcgggtgtagtctgactatgctatatttggtgcacggtcgatcctatgaagtgacg
ttcaagaacgtgggaccaatcaacgacaacgcgtggcacaaacttgtacttcatgtcact
ggcgtaaggaggaagaataatccgataccagaagcttccgtgtatgtggactgcgcactg
caggggaaagtaacgttgaaacgaggatacacgagtcttctgccattcgccaaaaagaaa
cccacctccgcgcaaatatggtttgcacagaggtcacgtggctaccgtggaggatttgag
agaccatggaggggaagtttacaaaatgtaaagtttgtattcaatcgagacattgaattg
ctgacagatcagacagtgtgttctaatttgagagacagcagacgaaagcagtactcgcca
ccatttacagagacggacacagattcgaggaaagaagacgacaaagaaacaactatcatc
tcacgtccctcgtttcaaggaatggcggcacaattttcgcagatggagattatgttgagc
aaacaaatgctggagacgcagtacttgcgacgcatcattgaaaatcttcagtttgcagac
agcagagtgccgtcgtgcaaatttgaaccgtgttatccaggggtgacgtgcatcgacacg
ccgaacaaaaaaccaggctacacgtgcggtcaatgtcccttaggaatggaaggcgatggt
acgaattgtaccgacatcgacgagtgtaaactgagtccgtgtttcaatggagttaaatgc
accaactctaagcaaggctacaaatgtgactcttgtccaattgggtatcgtggtggagta
gtcatgggagttggatatgaacatgccaggactaaacaggtttgcagggatatcaacgaa
tgcctaattccccaaaagtgcgcgcagttctcaaagtgtatcaacacccttggcagttat
aggtgcagtgcttgtgcggatggatattatggcaatccttatgtgaagtgcaacggaatc
agatattgctccggtaatgtcggctcgaacccatgtaacaaaaatgcatactgcataagc
aaatatcaaggaagatccttcgagtgctcgtgcaaagtgggttatgttggcgatggattg
ttttgtggcaaagacactgacctagacggtgttccagactatgcacttgcttgcactggg
ccacattgtgcaaaggataactgtcgagactatcccaatccagatcaaagcgacattgat
ggagacggttcgggagatgcttgtgataacgatattgacggagatggaatacctaatagc
aacgataactgcccgagggtaccgaacggagaccagaaagactctgacggtgattcagtt
ggagatgcttgtgataactgtccccgagcgccaaatgaagaccaaacggattcagatgga
gtaggaatgggcgatgcttgtgatcctgataacgacaatgatggagtgataaacagaagg
gacaattgcccgttcgtgaagaactcggaccaaagcgatgtggataaagacaatgtgggt
gataaatgcgacaactgtccgctgaaattcaatcctaatcaggaagacgcggactacgat
ttcttgggagatgcctgcgataatgatatggacagagatcgcgatggaattcaagattct
gtggacaattgccagtacatagcaaatgccgcacaactggacaacgacttcgacaaaaga
ggcgactcgtgtgatgcggacgatgataacgatggcataattgacatccacgacaactgt
ccactgatcgcaaacagatatcaacgattgtcaagatctcatggaagaggaattgagtgc
aagtatgactacgatggtgacagcgtgaaagacaaaatggacgagggtccacaagatgca
tccatgaccgcagtcgatttcagaaagcacgttctgttccgcgttgacggcgtggtaaga
aatgacacaaacacttggaaagtcgaacaaaaaggacgcgaagttcgcaaagttgaaggc
accaataacgacattcttattggtgacaaaaaattcgagtctgtcgaattcaacacaacc
atctatgtggacggcacaagctcctcagaggcacaaatgggactcgtctttggattccaa
aatgccaagctcttttaccttgtaatgtgggaaaagtcgaatagccacacgggactggtg
atcaaggaggtgaaatcaacaagaggaggatcttcggagctttacagtgcattgagaaat
acaaacaatgtctacggacagacaaatatcttgtggagatcctctgaccaaacaccgtgg
gaatcgtttcaggcctacaaatttttgctaaccttgagtgcatcgcggaagcgggcgagg
ataagtgtttacaaaggaggtgaagctctatttcgaactcccgaattgcaaaccacgtat
tatcgaggtggaaggattggcatgttcagtttcaatcaatcgaacgttgtttggacagcg
ctggaggtcaaatgtctcggcaaataa
DBGET
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