Xenorhabdus sp. TH1: WDV74_03465
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Entry
WDV74_03465 CDS
T11385
Symbol
mrcB
Name
(GenBank) bifunctional glycosyl transferase/transpeptidase
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
xet Xenorhabdus sp. TH1
Pathway
xet00550
Peptidoglycan biosynthesis
xet01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xet00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
WDV74_03465 (mrcB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
xet01003
]
WDV74_03465 (mrcB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
xet01011
]
WDV74_03465 (mrcB)
Enzymes [BR:
xet01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
WDV74_03465 (mrcB)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
WDV74_03465 (mrcB)
Glycosyltransferases [BR:
xet01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
WDV74_03465 (mrcB)
Peptidoglycan biosynthesis and degradation proteins [BR:
xet01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
WDV74_03465 (mrcB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transgly
UB2H
Transpeptidase
PBP1_TM
PBP1b_C
UvrB_inter
Orf78
Motif
Other DBs
NCBI-ProteinID:
WXG10799
LinkDB
All DBs
Position
790617..793085
Genome browser
AA seq
822 aa
AA seq
DB search
MSDDDRQPIGRKGKKSGLRRGRTSNKRNRRDDYENDNFDDNDEDEVMTKKGKNARSANSR
PPKKGGHWFLWLLLKIFIVLAILIVIYGFYLDNKIRERIDGKVWDLPAAVYGRMVNLEPG
MNYSKDEMIHLLEGMQYRRVTKITRAGEFVVRGNNIEMLRRPFDFPDGKEEQIQARLTFD
NNHLASIENMENHRQFGFFRLDPKLITMMQSPNGEQRLFVPRSGFPDLLVQTLLETEDRY
FYEHDGVRPLSIARAFLANLIAGRTIQGGSTLTQQLVKNLFLSNERTLIRKANEAYMALL
MDARYSKDRILELYLNEVFLGQSGNEQIHGFPLASLYYFGRPIDELSLDQQALLVGMVKG
ASWYNPWRHPKTALERRNVVLKILQNRKIIDQELYDLLSARPLGVKPKSGVITPQPAFMQ
LVRQELQEKLGDKVNDLSGVKIFTTLDPVSQDAAEKSVEEGVAALRKARKVDDLEGAMVV
VDRFSGEVRAMVGGSQPQYAGFNRALNARRLIGSLAKPATYLTALSQPDKYRLNTWLADE
PLSIPQAGGKPWEPKNFSRTFSGRVMLIDALARSMNVPTVNLGLDVGLDRISSTLVALGI
PAKEIQQIPAMLLGAINLTPMEMAQEFQTIASGGNRAKLSALRSIIAEDGTVIYQSYPQA
ERVVPPQAAYLTLYGMQQVVERGTGRSLTGKYGKYHLAGKTGTTNDLRDSWFTGIDGKEV
AIVWTGRDNNGPTNLTGATGALTIYRRYLDNETPLELNNRPPEGIVDMSVNEDGSFNCEG
SGIRVLPVWTDDPQKLCQQSVQQPIEENEEEAPGWLREMFGQ
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatgatgatcgtcagccaatcggacgcaagggtaaaaaatcaggacttcgtcgt
gggcgaacatctaacaaacgcaatcggcgggatgattatgaaaatgataactttgacgac
aacgatgaggatgaagtcatgactaaaaaagggaagaacgcccgcagtgcgaattcccgc
ccgcctaaaaaaggcgggcactggtttttgtggttgctgctaaaaatctttattgtgctg
gcgatcctcattgttatttatggtttctatctggataacaaaattcgcgagcgtattgac
ggaaaagtttgggatttaccggcagcggtgtacggacggatggtcaatcttgaacctggc
atgaattacagcaaggacgaaatgatccatctgctggaggggatgcaatatcgaagagta
acaaaaatcacccgtgccggtgaatttgtcgtcagggggaataacatagaaatgttacgc
cgcccatttgatttccctgatggtaaagaagagcaaattcaggcgcggttgacctttgat
aataatcatcttgccagcattgaaaacatggaaaaccatcgtcagtttggttttttccgt
cttgatcccaaattgatcaccatgatgcaatcacccaatggtgagcagcgtctgtttgtc
ccacgttccggctttcctgatttgttggttcagactttactggaaacggaagatcgttac
ttttatgaacatgatggcgtcaggccgctttccattgcccgtgcatttttagctaacttg
atcgcgggacgtacaattcagggtggcagtaccctgacgcagcaattggtgaaaaatttg
tttctctccaatgaacgtactttgatccgtaaagcgaatgaagcgtacatggcgttgcta
atggatgcgcgttatagcaaggatcgcattctggaattgtacttgaacgaagttttttta
ggacaaagtggtaatgagcagatccatggttttccattggcaagtctgtactattttggt
cgcccgattgatgaattgagtttggatcaacaagcgctgctggtgggaatggtcaaaggg
gcttcgtggtataacccatggcgtcatcctaaaactgcgctggagcggcgcaatgttgtt
ttgaaaatcctccagaaccgaaaaatcatcgatcaggagctgtatgatctacttagtgct
cgtccgttaggggtaaaaccgaaaagcggggtgattacgccacagccagcctttatgcaa
ttggttcgtcaggaattgcaagaaaagctgggcgataaagtcaatgatttgtcaggggta
aagatctttactaccctcgatccggtttcgcaggatgcggcagaaaaatccgttgaagag
ggcgttgctgccctgcgaaaagcccgcaaggttgatgatctggaaggggcgatggttgtt
gttgaccgtttcagcggtgaggttagagctatggttggcggttcccagccgcaatatgcc
ggatttaaccgggcgttaaacgcccgtcgtttgattggctcacttgctaaaccagccacg
tatctgacggcattgagccagccggataaatatcgtctgaatacctggctggcggatgaa
cctctctctattcctcaagcaggtggaaagccttgggaaccgaagaactttagccgtact
ttcagtgggcgtgtcatgctaattgacgcgttagcgcgttcgatgaatgtgccgaccgtg
aatttagggctggatgttgggttagaccgcatctccagcacgttggttgcgcttggtatt
cctgcgaaagagatccaacaaatccctgcgatgttattaggcgcgattaacctcacgcca
atggaaatggcacaagaattccagacgattgccagcggggggaatcgggcgaaactttct
gcgttgcgctccatcattgctgaagatggtacggtgatttaccagagctacccacaggca
gagcgtgttgtgccgccacaggccgcttatctgacgctatatggtatgcagcaggtagtg
gagagaggtacagggcgctcactgacagggaaatatggcaaatatcacctggcaggcaaa
accggaacaaccaatgatctgcgtgacagttggtttaccggcattgatggcaaagaagtc
gcgattgtctggactggacgtgataacaatggcccaactaacctaaccggagcgacgggt
gcactgacgatttatcgtcgttatctggataatgaaacgccactggaactgaataaccgt
ccaccagaaggtatcgtggatatgtcagtcaatgaagatggcagtttcaactgcgaagga
agcggtatcagagtattaccggtttggactgatgatccacagaagttgtgccagcaatcg
gtacaacagcctatcgaggaaaatgaagaagaagcgcctggctggttacgtgagatgttt
ggacagtga
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