Xenorhabdus sp. TH1: WDV74_09210
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Entry
WDV74_09210 CDS
T11385
Symbol
xthA
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
xet Xenorhabdus sp. TH1
Pathway
xet03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
xet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
WDV74_09210 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xet03400
]
WDV74_09210 (xthA)
Enzymes [BR:
xet01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
WDV74_09210 (xthA)
DNA repair and recombination proteins [BR:
xet03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
WDV74_09210 (xthA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Exo_endo_phos_3
YozE_SAM_like
Motif
Other DBs
NCBI-ProteinID:
WXG08884
LinkDB
All DBs
Position
2072649..2073455
Genome browser
AA seq
268 aa
AA seq
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MKFISFNINGLRARHHQLAAIVEQHQPDVIGLQEIKVHDEMFPLEEVSKLGYHIFYHGQK
SHYGVALLTRQQPVDIRKGFPTDDDDAQRRIIMADIETPVGLLTVINGYFPQGESRDHPI
KFPAKEKFYQDLLSYLETNHSPESHILIMGDMNISPTDLDIGIGENNQKRWLKMGKCSFL
PEEREWMERLKNWGLIDTFRVKYPEANDQFSWFDYRSKGFDDNRGLRIDLLLASHPLAER
CISSGIDYAIRSMEKPSDHAPIWTEFKI
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttatatcatttaatattaatgggttaagagcacgtcatcatcaactcgcagcc
attgttgaacaacaccaacctgatgttatcggattacaagaaataaaagtccatgatgaa
atgtttcctctggaagaagtcagtaagctgggttatcacattttttatcatggtcaaaaa
tctcactacggtgtcgcattgctaactcgccaacaaccagtggatatccgtaaaggtttt
cctactgatgacgatgatgcacagcgccgcattattatggccgatatcgagacacctgtt
ggtttattaactgtaatcaatggctattttcctcaaggagagagccgtgatcatccgatt
aaatttcctgcaaaagaaaaattttatcaggacctactatcttacctagaaactaatcat
tctccggagtcacacattttgattatgggagacatgaacatcagtccaacagatctcgat
atcggcattggagaaaacaaccagaaacgctggttaaaaatgggaaaatgttctttctta
ccagaagagcgagaatggatggaacgcttaaaaaattgggggcttatcgatacattccgg
gtaaaatatcctgaagctaatgatcagttttcttggttcgactatcgttcaaaaggtttt
gatgataatcgtggactgcgcattgatttgctgcttgccagccatcctctggcagaaaga
tgtatatcctctggtatcgattatgctatacgcagtatggaaaaaccatccgatcatgcc
cctatttggacagagtttaagatataa
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