KEGG   Xenorhabdus sp. TH1: WDV74_13360
Entry
WDV74_13360       CDS       T11385                                 
Symbol
ribD
Name
(GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
xet  Xenorhabdus sp. TH1
Pathway
xet00740  Riboflavin metabolism
xet01100  Metabolic pathways
xet01110  Biosynthesis of secondary metabolites
xet01240  Biosynthesis of cofactors
xet02024  Quorum sensing
Module
xet_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:xet00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    WDV74_13360 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    WDV74_13360 (ribD)
Enzymes [BR:xet01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     WDV74_13360 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     WDV74_13360 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD RNase_H
Other DBs
NCBI-ProteinID: WXG09618
LinkDB
Position
complement(3058591..3059697)
AA seq 368 aa
MTLDEIYMSRALELAYQGRFTTSPNPNVGCVIVKDEQIIGEGFHLRAGEPHAEVHALSMA
GEKAKGATAYVTLEPCSHHGKTPPCADALIAAGLSRVVVAMQDPNPQVAGRGLYKLQQAG
IAVEHGLMMEQAETLNKGFLKRMRTGFPYLQLKLGASLDGRTALASGESKWITSPEARQD
VQKLRAQCSAILSSSATVLADDPSLTVRWNELDAETQAVYPQEWLRQPIRIITDSQNRVT
PQHQVVQQPGECWLARTKQDQQKWPDNTEQILLPEHGVGVDLVLLMMQLGKRQVNSVWVE
CGSALAGALLSLGLVDELILYIAPKILGNSARGLFDIPELQKLSDAPEFTLFDVQQIGPD
VRLRLRPC
NT seq 1107 nt   +upstreamnt  +downstreamnt
atgacacttgatgaaatatatatgtccagagcgctggaactggcgtatcaaggacgtttt
acaacatccccaaatccgaatgtaggttgcgtcatcgttaaggatgagcagataatcggg
gaaggttttcatttacgggcgggcgaacctcacgcagaagttcacgctctgagtatggcc
ggtgaaaaagcgaaaggcgctacggcttatgttacccttgaaccatgcagccatcacggt
aaaacccccccttgtgctgatgctttaattgccgcaggtttaagccgtgttgtggtagcg
atgcaagatcccaatcctcaagttgctgggcgtggtttgtataaattgcagcaggccgga
attgcagttgaacatggtttaatgatggaacaggcggaaaccttgaataaggggtttctt
aaacgtatgcgtacaggattcccgtacctgcaattgaaactgggcgcatcattggatggt
cgaactgcgttggcatcaggggaaagcaagtggattacctcaccggaagcccgccaggat
gtacagaaactacgggcgcagtgcagtgctattttgagttctagcgcaacggtactggca
gatgatccttccctgactgtccgttggaatgaactggatgctgaaacccaagcggtttat
ccgcaagaatggcttcgccaaccaatccgtatcattacagatagccaaaatcgtgtaact
ccacagcatcaagttgtccagcaaccaggggaatgttggttagctcgtactaagcaagat
cagcaaaaatggcctgataataccgaacagattttattgccagaacatggtgttggtgtt
gatttagtgttgctgatgatgcaacttggaaagcgtcaggtaaattctgtgtgggtggaa
tgtggctccgctttggctggggctttattgtcgttagggttggtcgatgaattgattctg
tatatcgcgcctaagatattgggaaatagtgcccgtggattgttcgatatccctgaattg
caaaaattatcggatgctcctgaatttactctgtttgatgttcaacagattggtcctgat
gtgcgtctccgcttacggccgtgttaa

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