Xenorhabdus sp. TH1: WDV74_15330
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Entry
WDV74_15330 CDS
T11385
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
xet Xenorhabdus sp. TH1
Pathway
xet03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xet00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
WDV74_15330 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xet03019
]
WDV74_15330 (recQ)
03400 DNA repair and recombination proteins [BR:
xet03400
]
WDV74_15330 (recQ)
Enzymes [BR:
xet01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
WDV74_15330 (recQ)
Messenger RNA biogenesis [BR:
xet03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
WDV74_15330 (recQ)
DNA repair and recombination proteins [BR:
xet03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
WDV74_15330 (recQ)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WXG09973
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Position
complement(3518405..3520231)
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AA seq
608 aa
AA seq
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MSTAELISTASLAEQALRKTFGYQQFRPGQQQVIDAVLDGRDCLVVMPTGGGKSLCYQIP
ALVKNELTLVVSPLISLMKDQVDQLRANGVEAECLNSTQSREQQFDIIQRCRNGSVKLLY
IAPERLVTDNFLDQLRDWQPVLLAVDEAHCISQWGHDFRPEYRALGQLRRRFPDLPVIAL
TATADKATRQDIVRLLELHEPIIHISSFDRPNIRYTLVEKYKPLDQLWSFVRGQQGKSGI
IYCNSRNKVEETAERLQKRGISVAPYHAGLENSQRAWVQDAFQRDDLQVVVATVAFGMGI
NKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAVLFYDPADMVWLRRCLEEKPAGEQ
QDIERHKLNAMGAFAQAQTCRRLVLLNYFGESRQTACGNCDICLDPPKRYDGLVEAQKAL
SCIYRVGQRFGIGYIVEVLRGSNNQRIRDFGHDKLPVYGIGKEQSQEHWMSVLRQLIHLG
LISQNIANYSALQLTEAARPILRGEVSLQLAVPRIQNLKSRNQQNKSYSGNYDRKLFAKL
RKLRKSIADENNIPPFVVFNDVTLIEMAEQCPITPDELLLINGVGQRKLERFGDAFMTLI
REHFEEFE
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
gtgtctaccgcagaacttatcagcacggcatcgctggctgaacaagcattacgaaaaaca
ttcggataccagcaatttcgtccgggacagcagcaagttattgacgccgttcttgacgga
cgagattgtctggtggttatgccgacaggaggcggtaagtcactgtgctaccagatccct
gcattggttaaaaatgagctgactctggttgtatctccactcatttcattgatgaaagac
caggttgatcagctacgtgcgaatggcgttgaagcggaatgtctgaactcaactcaaagt
cgtgaacagcaatttgatatcattcaacgttgccgtaatgggagtgttaaactgctttat
atcgcccctgaacggttagtaacggataattttcttgaccaacttcgcgactggcagcct
gttttattggctgtcgatgaagctcattgtatttctcaatgggggcatgattttcgccca
gaatatcgagcattagggcaacttcgtcgtcgcttccccgatcttccggtgatcgcatta
acagccacagcagataaagcgacccgccaggatatcgtgcgtttattggagttgcatgag
ccgattatccatatcagcagctttgatcgtccgaatattcgctataccttagttgaaaaa
tacaaaccgcttgatcagctctggtcatttgtccgtggccagcagggaaaaagtggcatt
atctattgcaatagtcgtaataaagtagaagaaactgcggagcgtctgcaaaagcggggg
ataagtgttgcgccttaccatgcagggttggaaaacagccaacgggcatgggtacaagat
gctttccagcgagatgatttgcaggtcgttgtagcaacggttgcatttggtatgggaatt
aataaacctaatgtgcgttttgtcgtgcattttgatattccccgtaatatcgaatcttat
tatcaggaaactggccgggctgggcgagatggtttaccggcggaagcggtgctgttttac
gatcctgcggatatggtatggctgcgtcgctgtttagaagaaaagcccgccggtgaacaa
caggatattgagcggcataaactcaatgctatgggcgcatttgcacaggcacagacctgt
cggcgtttggtattgttgaattatttcggagaaagtcgccaaacagcgtgtggcaactgt
gatatttgccttgatcctcccaaacgttacgacggtctggtagaagcacagaaagcgctg
tcttgtatctatcgcgttggacaacgttttggcattggctatattgtagaagtgctacgt
ggttcaaataatcaacgcattagagattttggacacgacaaactgcctgtgtatggcatt
ggtaaagaacagagtcaggaacattggatgagcgtcttgcgtcagcttattcacttgggg
cttatcagccaaaacattgccaactattctgctctgcaattgaccgaagctgctcggccg
atattacgtggcgaagtgtctctacaacttgccgtaccacgtatccaaaacttaaaaagc
cgtaatcagcaaaacaaatcgtacagcggcaactatgatcgcaaattatttgctaagttg
cgaaaattgcgtaagtccattgctgatgaaaacaatattccaccttttgttgttttcaat
gatgtcacgttaattgagatggcagaacagtgcccaataacaccggatgaacttttgctg
attaatggcgttggtcagcggaaattggagcgttttggtgatgcctttatgaccttaatc
cgagagcattttgaagaatttgagtaa
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