Xenorhabdus sp. TH1: WDV74_15370
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Entry
WDV74_15370 CDS
T11385
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
xet Xenorhabdus sp. TH1
Pathway
xet00300
Lysine biosynthesis
xet00470
D-Amino acid metabolism
xet01100
Metabolic pathways
xet01110
Biosynthesis of secondary metabolites
xet01120
Microbial metabolism in diverse environments
xet01230
Biosynthesis of amino acids
Module
xet_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
xet00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
WDV74_15370 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
WDV74_15370 (dapF)
Enzymes [BR:
xet01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
WDV74_15370 (dapF)
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
CntK_N
Motif
Other DBs
NCBI-ProteinID:
WXG09981
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Position
complement(3528054..3528878)
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AA seq
274 aa
AA seq
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MQFSKMHGLGNDFMVVDAVTQNVYFSPELICRLANRNTGVGFDQLLIVEAPYDPDLDFHY
RIFNADGSEVSQCGNGARCFARFVRLKGLTNKRDIKVSTQAGRMILSITNDEQVCVNMGE
PDFEPQRIPFRANKAEKTYIIRAIERTVLCGVVSMGNPHCVIQVEDVDTAEVEILGPVLE
SHERFPERANIGFMQVINRGHIRLRVFERGAGETRACGSGACAAVAIGIQQDLLDNQVRV
DLPGGTLQIRWDGSGKPLFMTGPATHVYDGTIHL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcagttctccaaaatgcatggtcttggtaatgattttatggtcgttgatgcagtgacc
caaaatgtttatttttctccagagttaatttgccgtttggctaatcggaatactggggtg
ggttttgatcaacttttgattgttgaagcaccctatgatcctgacttagactttcattac
cgcatttttaatgctgacggcagtgaagtttcccagtgtggtaacggggcacgttgcttt
gctcgttttgtccgtctcaaagggttgactaataagcgtgatatcaaggtcagtacacag
gccggccgaatgatattaagcatcacaaatgatgagcaagtttgtgtcaacatgggcgag
ccggactttgagccgcagcgtattccatttcgtgccaataaggctgaaaaaacctatatt
atccgtgctattgaacggacagtgctttgtggcgttgtgtcgatgggtaaccctcattgc
gtcatacaggttgaggatgtggacactgccgaagtggaaatattgggaccggtgttggaa
agccatgagcgttttcctgaacgcgccaatattggtttcatgcaggtaatcaatcgaggt
catattcgattgcgtgtctttgagcgaggagccggtgagacacgggcatgtggcagtggc
gcgtgtgcagcagtagcaatcggtattcagcaagatctgttggataaccaggttcgggtt
gatcttccaggagggacactgcaaattcgctgggatgggtcgggaaaacccctttttatg
actgggcctgcaactcatgtttatgatggtacgattcatttgtga
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