Xanthomonas euroxanthea: XSP_000539
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Entry
XSP_000539 CDS
T07902
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
xeu
Xanthomonas euroxanthea
Pathway
xeu02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
xeu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
XSP_000539
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xeu03021
]
XSP_000539
Transcription machinery [BR:
xeu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
XSP_000539
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
HTH_24
HTH_28
HTH_IclR
HTH_29
HTH_10
HTH_11
HTH_Tnp_ISL3
PhyR_sigma-like
HTH_31
Rv2175c_wHTH
Sigma70_ECF
HTH_38
Fe_dep_repress
HTH_AsnC-type
HTH_Mga
HTH_Tnp_4
HTH_7
GerE
DUF722
MarR_2
Motif
Other DBs
NCBI-ProteinID:
CAD1787254
LinkDB
All DBs
Position
1:638851..639360
Genome browser
AA seq
169 aa
AA seq
DB search
MSVTQGALHQQVERLYTDHHGWLQGWLRRKLGDAFVAADLAQDTFISVISAGAADQIREP
RPFLATIARRLMAHRQRRKLLETSYLELLAALPEELAPSPELQLLALEAVQQVDQALDGL
PPKVKEAFLLAHLQELSYAQIAQRLGVSSSSVKQYLTRANRHCLFALSA
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggtcacgcaaggcgcgcttcatcagcaggtggagcgcctgtacaccgaccaccac
ggctggctgcagggctggctgcggcgcaagctgggcgatgcgttcgtggctgccgacctg
gcgcaagacaccttcatcagcgtgatcagcgcgggggcggccgaccagatccgcgaaccg
cgcccgttcctggccaccatcgcgcgccgcttgatggcgcaccggcagcggcgcaagttg
ctggaaaccagctacctggaactgctggctgcgctgccggaagaactggcgccgtcgccg
gagctgcaattgctggcgctggaagcggtgcagcaggtggaccaggcgctggatggcctg
ccgcccaaggtgaaggaagcctttctgctggcgcatctgcaggagctgagctacgcgcag
atcgcgcagcggctgggcgtgtccagcagctcggtcaagcaatatctcacgcgtgccaac
cggcattgcctgttcgccctgtcggcgtga
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integrated database retrieval system
