Xanthomonas euroxanthea: XSP_002061
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Entry
XSP_002061 CDS
T07902
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
xeu
Xanthomonas euroxanthea
Pathway
xeu02020
Two-component system
xeu02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
xeu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
XSP_002061 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
XSP_002061 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xeu03021
]
XSP_002061 (rpoN)
Transcription machinery [BR:
xeu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
XSP_002061 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_3
HTH_IclR
HTH_23
Sigma70_r4
HTH_31
HTH_Crp_2
HTH_38
Phage_CII
Motif
Other DBs
NCBI-ProteinID:
CAD1791752
UniProt:
A0A8E4ENM7
LinkDB
All DBs
Position
1:complement(2415868..2417268)
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AA seq
466 aa
AA seq
DB search
MKTTISAQLGQQLHLTPQLLQSIRLLQLDGMQLELEIRRALETNPLLELEELADSDAVAS
SDDGASDVAAFDELPESTMWDVPSSSWNDGDDDRMQRVAAGESTDPHVRILRELALDLDE
AALGAAAFWLEQTDEAGYLTEALATLQQLGATRLGMTVQAVEAVRQRLLHGDPAGLAACD
LRECLQAQLTALPGRVPARHLAARILAGDLDLLASHDYPLLARAHDAEVDDAREAVRLIL
SLQPRPGDDLLQESNASVIPDVLAWHADGSWRVALNPATTHRVSINPVHERALAEAGDAA
QPLRDMLQEARWLTRGLSMRYETLLRATRAIVERQATFLVRGEEAMAPLTLKEIADEIGM
HESTISRITTGKYIQTPRGTFELKHFFAVRLEGASVSGQAVKAMVRRLIESEPAGRPLAD
EAIAGLLSRQGVNIARRTVAKYREQLDIAPARERRRTNKPPLARAG
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgaccatttccgcccagcttggccagcaactgcacctgaccccgcagttgctg
cagtcgatccgtctgttgcagttggacggcatgcagttggaactggaaatccgtcgcgcg
ctggaaaccaatccactgctggagctggaagagctggccgacagcgacgccgtcgcgagc
agcgacgatggcgcctccgatgtcgccgccttcgacgaactgccggaaagcacgatgtgg
gacgtgccgagcagcagctggaacgatggcgacgacgaccgcatgcagcgcgtggcagcc
ggcgaatccaccgacccgcacgtgcgcatcctgcgcgagctggcactggacctggacgag
gccgcattgggggccgccgcgttctggctggagcagaccgacgaggccggctatctgacc
gaggccctggcgacgctgcagcagctcggcgcgacccggcttggtatgaccgtgcaggca
gtggaagcggtccgccagcgcctgctgcacggcgacccggccggcctggccgcctgcgac
ctgcgcgagtgcctgcaggcccagctgaccgccctgcccggccgcgtgccggcgcgtcat
ctggccgcgcgcatccttgccggcgacctggacctgctggccagccacgactatccgctg
ctggcgcgcgcgcacgatgccgaagtggacgatgcacgcgaggcggtccggctgatcctg
tcgctgcaaccgcgccccggcgatgacctgctgcaggaaagcaacgccagcgtgattccg
gacgtgctcgcctggcatgccgacggcagctggcgggtggcattgaacccggccaccacc
catcgggtgagcatcaatcccgtgcatgagcgtgcactggccgaggccggcgacgccgcc
cagccgctgcgcgacatgctgcaggaagcgcgctggctgacccgcggcctgtcgatgcgc
tacgagaccctgctgcgcgccacgcgcgccatcgtcgaacgccaggccacgttcctggtg
cgcggtgaggaagcgatggcaccgctgacgctgaaggaaatcgccgatgagatcggcatg
cacgaatcgacgatttcgcgcatcaccaccggcaaatacatccagaccccgcgcggcacc
ttcgagctcaagcacttctttgcggtgcgtctggaaggcgccagcgtttccggccaggcg
gtcaaggcgatggtgcgccgactgatcgaaagcgagccggccggccggccgctggccgac
gaagccatcgccgggctgttgtcgcgccagggcgttaacattgcccgtcgcactgtggcc
aagtaccgcgaacaactcgacatcgccccggcacgcgagcgccgccgcaccaacaaaccg
ccgcttgcccgggcaggataa
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