Xanthomonas euroxanthea: XSP_002425
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Entry
XSP_002425 CDS
T07902
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
xeu
Xanthomonas euroxanthea
Brite
KEGG Orthology (KO) [BR:
xeu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xeu03016
]
XSP_002425 (rnd)
Enzymes [BR:
xeu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
XSP_002425 (rnd)
Transfer RNA biogenesis [BR:
xeu03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
XSP_002425 (rnd)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
CAD1792820
UniProt:
A0A8E4ESA0
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All DBs
Position
1:2867422..2868516
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AA seq
364 aa
AA seq
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MPHWITHPSELTERLQASRPSRIGLDTEFIRERTYWPQLALVQMAIGEEILLIDPLIPGM
NEALKAWLTATDIVKVMHSASEDLVTFKCACGVLPRPLFDTQIAAALAGVGGGMGYQKLV
QEVTGTLLSKGETRSDWMRRPLSPAQLEYAADDVRYLFAIHDELTRRLTEQDRLGWLAED
AERLLATVEHDDGERWPHVSLRTAQFLEPAAQRRLLRLLRWRDLQARQSDRPRSWILDNE
LASQLARFPPADLDALLRQFDKFPKAPRKLAAAVWEALNTPLPDEEHAPLAQAATDGNKA
VLKRLQDAVAQRSRELGLPDGILASRRHLETLIEQRSWPAPLGQWRRHALEAQLTPLLED
TATQ
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
gtgccccattggatcacccacccctccgagctgaccgaacgcctgcaggcgtcgcgtccg
tcccgcattggcctggataccgaattcattcgcgaacgcacctactggccgcaactggcg
ctggtgcagatggccatcggcgaggagatcctgttgatcgacccactgatcccgggcatg
aacgaggcgctcaaggcgtggttgaccgccaccgacatcgtcaaggtgatgcatagcgcc
agcgaggatctggtcaccttcaaatgcgcgtgcggggtattgccgcggccgttgttcgac
acccagatcgccgccgcgctggcgggtgtgggtggcggcatgggctatcagaaactggtg
caggaagtgaccggcaccttgctgagcaagggcgagacgcgctcggactggatgcgccgc
ccgctgtcgccggcgcagctggaatacgccgccgacgatgtgcgctacctgttcgccatc
cacgacgaactcacccgtcgcctgaccgagcaggatcgcctgggctggctggccgaagat
gccgagcgcctgctcgccacggtggagcacgacgacggcgagcgctggccgcatgtgagc
ctgcgcaccgcgcagttcctggaaccggcggcgcaacgtcgcctgttgcgcctgctgcgc
tggcgcgacctgcaggcgcgtcagagcgatcgcccgcgcagctggatcctggacaacgaa
ctggccagccagctggcacggtttccgccggctgatctggacgccctgctgcgtcagttc
gacaagttccccaaagcgccgcgcaagctcgccgccgccgtatgggaagcgctcaacacg
ccgctgcccgacgaggagcacgcgccgctggcgcaggccgccaccgacggcaacaaggcc
gtgctcaagcgcctgcaggatgcggtggcccagcgcagccgcgagctgggattgcccgac
ggcatcctggcctcgcgccggcacctggaaaccctgatcgagcaacgcagctggcctgca
ccgctgggacaatggcgccgccacgccctggaagcgcagctgacgccactgctggaagac
actgcgacgcagtga
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