Xanthomonas euroxanthea: XSP_002904
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Entry
XSP_002904 CDS
T07902
Name
(GenBank) polysaccharide lyase family 1 protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
xeu
Xanthomonas euroxanthea
Pathway
xeu00040
Pentose and glucuronate interconversions
xeu01100
Metabolic pathways
xeu02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
xeu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
XSP_002904
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
XSP_002904
Enzymes [BR:
xeu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
XSP_002904
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
CAD1794225
UniProt:
A0A8E4EVE1
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Position
1:complement(3424585..3425646)
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AA seq
353 aa
AA seq
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MIIKTFQGAVALALSACAAGAIAAPVGYGAGTTGGGNKTPVTVTTFEAMQAAIDSYSGSG
GLVLNYTGKFDFSSIKDVCAQWKLPAKTVQIKNKSNITIKGANGSSANFGLWVVGNSSNV
IIQNMTIGLLQGGEDADSISLEGNSSGSPSNIWVDHNTVFASLTKCSGAGDASFDGGIDM
KKGTHHVTVSYNHVYNYQKVALNGYSDSDTKNSAARTTYHHNRFENVESRVPLQRRGLSH
IYNNYFNNVTTSGINVRMGGVAKIESNYFENIKNPVTSRDSSEIGYWDLINNYVGSGITW
STPDGSKPYANATNWITTKVFPEPLGYTYSITPAAQVKAKVIATAGAGTNLAE
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcaagacattccagggcgcagttgcgcttgcactgtccgcctgcgctgcgggc
gccatcgccgccccggtcgggtacggtgccggcaccaccggcggcggcaacaagacaccg
gtcactgtgaccaccttcgaggcgatgcaggctgcgatcgacagttattccggcagcggc
gggttggtgctcaactacaccggcaagttcgacttcagcagcatcaaggacgtctgcgca
cagtggaagttgccggccaagaccgtgcagatcaagaacaagagcaacatcactatcaag
ggggccaacggctcgtcggccaacttcgggctttgggtggtgggcaactccagcaacgtc
atcatccagaacatgaccatcggcctgctgcagggcggtgaagatgccgactcgatttcg
ctggagggcaattccagcggctcgccgtccaatatctgggtggaccacaacaccgtgttc
gcctcgttgaccaagtgctcgggtgccggcgatgcgtctttcgacggcggcatcgacatg
aagaagggtacccatcacgtcaccgtgtcctacaaccacgtctacaactatcaaaaggtc
gcgctcaacggatacagcgacagcgacaccaagaactcggccgcacgcaccacctatcac
cacaaccgcttcgagaacgtcgaatcgcgcgtgccgctgcaacgtcgcgggctgagccac
atctacaacaactacttcaacaacgtcaccacctcgggcatcaacgtgcgcatgggcggg
gtggccaagatcgagtccaactacttcgagaacatcaagaacccggtgacctcgcgcgac
agcagcgagatcggctactgggacctgatcaacaactacgtcggcagcggcatcacctgg
agcaccccggacggcagcaagccttacgccaacgccaccaactggatcaccaccaaggtg
ttccccgaaccgctgggctacacctacagcatcaccccggccgcacaggtcaaggccaag
gtgatcgccaccgccggtgcgggcaccaacctggccgagtaa
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