Xanthomonas euroxanthea: XSP_003079
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Entry
XSP_003079 CDS
T07902
Name
(GenBank) type III PLP-dependent enzyme
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
xeu
Xanthomonas euroxanthea
Pathway
xeu00300
Lysine biosynthesis
xeu00470
D-Amino acid metabolism
xeu01100
Metabolic pathways
xeu01110
Biosynthesis of secondary metabolites
xeu01120
Microbial metabolism in diverse environments
xeu01230
Biosynthesis of amino acids
Module
xeu_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
xeu00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
XSP_003079
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
XSP_003079
Enzymes [BR:
xeu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
XSP_003079
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
DUF6401
NACHT_N
Motif
Other DBs
NCBI-ProteinID:
CAD1794742
UniProt:
A0A8E4E211
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All DBs
Position
1:3654218..3655507
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AA seq
429 aa
AA seq
DB search
MSLRIDSDAVMQALPGIRNQSDGPLCAYVYDLAALDAHAAWMRAQLPEAGELFYAAKANA
EPPILQTLAPHVDGFEAASGGELAWLHRQQPTAALLFGGPGKLDAELAQAASLPNCTVHV
ESLGELERLAAIAAQAGRCVPVFLRMNIAVPGAQSTRLMMGGQPSPFGLDPDALDAAIQR
LRASPSLRLEGFHFHLMSHQRDAGAQLHLIAAYLRTVQQWRQRYGLGPLRVNAGGGFGVD
YLAPESSFDWAGFCAGLPGLLREHGQALRLRLEPGRYVSASCGWYLMDVLDLKRSHGAWF
AIARGGTHHFRTPAAQGHDHPFRVLRGRHAPVLRDTPVTLVGQLCTPKDVLARNQHVAAL
APGDCLAFPLAGAYAWNISHQQFLMHPPPQMVFLPAAAQAAATASVEGWTGTRMSARNAA
SATASGSSR
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgcgcatcgatagtgacgcagtgatgcaggcattgccgggcatccgcaaccaa
agcgatggcccgctgtgcgcctacgtctacgacctggccgctctggatgcgcatgcggca
tggatgcgcgcgcagctgcccgaagcgggcgagctgttctacgcggccaaggccaatgca
gagccaccgatcctgcaaacgctcgccccgcacgtggatggcttcgaggcggcctccggc
ggcgaactggcctggctgcatcggcaacagcccacggccgcgttgctgttcggcggcccg
ggcaagctcgatgccgaactggcccaggctgcctcgctgcccaactgcaccgtgcatgtg
gaaagcctgggcgaactggaacgcctggccgcgatcgcggcgcaggccggccgctgcgtg
ccggtgttcctgcgcatgaacatcgccgtgcccggtgcgcagagcacgcgcctgatgatg
ggcgggcagccctcgccgttcggcctggacccggacgctctggatgcggcgatccagcgc
ctgcgggccagcccctcgctgcggctggagggcttccatttccacctgatgtcgcaccag
cgcgatgccggcgcgcagctgcatctgatcgccgcctacctgcgcaccgtgcagcagtgg
cggcaacgctatgggctcggcccgttgcgggtgaatgcaggcggcggcttcggggtggat
tatctggcgccggaatcgtcgttcgactgggccggcttctgcgccggcctgcctggcttg
ctgcgtgaacacggccaggcgctgcgcctgcggctggagcccggccgctatgtcagcgcc
agctgcggctggtacctgatggacgtgctggacctcaagcgcagccacggcgcgtggttt
gcgatcgcccgcggcggcacccatcacttccgcaccccggccgcgcaggggcacgatcac
ccgttccgtgtgctgcgtggcaggcacgcgccggtgctgcgcgacaccccggtcaccctg
gtcgggcagctgtgcacgccgaaggacgtgctggcgcgcaaccagcacgttgccgcgctg
gcaccgggcgactgcctggccttcccgctggccggcgcatatgcctggaatatttcgcac
cagcagttcctgatgcatccgccgccgcagatggtgttcctgccggcggcggctcaggcg
gcggcaacggcgtcggtcgaaggctggaccggcacgcggatgtctgcacgcaacgctgcc
tctgccactgcttccgggtcgtcaaggtag
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