Xanthomonas euroxanthea: XSP_003527
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Entry
XSP_003527 CDS
T07902
Name
(GenBank) UdgX family uracil-DNA binding protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
xeu
Xanthomonas euroxanthea
Pathway
xeu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
xeu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
XSP_003527
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xeu03400
]
XSP_003527
Enzymes [BR:
xeu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
XSP_003527
DNA repair and recombination proteins [BR:
xeu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
XSP_003527
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
Motif
Other DBs
NCBI-ProteinID:
CAD1796067
UniProt:
A0A8E4EXI2
LinkDB
All DBs
Position
1:complement(4215411..4216838)
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AA seq
475 aa
AA seq
DB search
MFNADVAPGWSLDAWRALARAGWCAQVEPDSIAWNGGAQGGLLMGQGLLDLPAVVAPPRV
SAAFLQMAGAVLCHRDPQRHAVLYRLLWRVASGERALLERATDVDVHRVTQWQKAVQRDT
HKMKAFVRFRRLPVEEEDFVAWFEPEHWIVDRVGPFFARRFAGMRWAILTPYRSVRWDGE
ALTFGEGAVRTQVPADDAQETLWRTYYAHIFNPARLNPTMMRQEMPQKYWKNLPEARLLP
ELIREAGVRVREMAERAPEPVRRRVPVAPTPIPEVATQSLAQLRVAARDCRRCALWQPAT
QTVFGEGPSDASVMVIGEQPGDEEDLSGRPFVGPAGRLFNRALDEIGLDRTTVYVTNAVK
HFRFEQRGKRRLHRNPERSHVQACSGWLQAERAQLRPAQIVCLGATAAQAVLGNSFRLMQ
QRGQWLRLDDGTPVLTTVHPSWVLRQGSEAAREDGYRGFVADLRQLLDAPSAART
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacgctgacgttgcgccgggctggagccttgacgcatggcgtgcattggcgcgg
gcggggtggtgcgcgcaggtggagccggactccatcgcgtggaatggcggagcgcagggc
ggcctgttgatggggcaggggctgctggatctgccggccgtggttgcgccgccgcgggtg
tcggccgcgttcctgcagatggcgggggcagtgctgtgtcatcgcgacccgcagcgccat
gcggtgctgtaccgcttgttgtggcgggtggcgagcggagagcgcgcgctgctggagcgg
gccaccgatgtcgatgtgcatcgggtgacgcagtggcaaaaggcggtgcagcgcgacacc
cacaagatgaaggcgttcgtccgctttcggcggttgccggtggaagaggaagacttcgtg
gcgtggttcgagcccgagcactggatcgtggaccgggtggggccgtttttcgcgcgccgc
ttcgccggcatgcgctgggcgatcctcaccccgtatcgcagcgtgcgctgggatggcgag
gcattgacgttcggcgagggtgccgtgcgcacccaggtgccggccgacgatgcgcaggag
acgctctggcgcacctattacgcgcatatcttcaatccggcgcggctcaacccgaccatg
atgcggcaggaaatgccgcagaaatactggaagaacctgcccgaggcgcgcttgctgccg
gagctgatccgcgaggccggcgtgcgcgtgcgcgagatggccgagcgtgcgcccgagccg
gtgcggcggcgcgtgccggtagcgccaacgccgatcccggaagtggccacgcaaagcctg
gcgcagttgcgcgtggccgcgcgcgattgccggcgctgcgcattatggcaaccggcaacg
cagacggtgttcggcgaggggccgagcgacgcgtcggtgatggtgatcggcgagcagccc
ggcgacgaagaggatctgagcgggcgtccgttcgtcgggccggccgggcgtttgttcaat
agggcactggacgagatcggtctcgatcgcaccacggtctacgtgaccaatgcggtcaag
catttccgtttcgagcaacgtggcaagcggcgtctgcatcgcaacccggaacgctcgcat
gtgcaggcctgcagtggctggttgcaggccgagcgcgcgcagctgcgtccggcacagatc
gtgtgcctgggcgcgactgccgcacaggcggtgctgggaaacagcttccgcctgatgcag
cagcgtggccagtggctgcggctggacgacggcacgccggtgctgaccaccgtgcatccc
tcatgggtactgcggcagggctcggaggccgcacgcgaggacggctaccgcggatttgtc
gccgacctgcgccagttgctggatgcaccgagcgcggcgcggacataa
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