Xanthomonas euroxanthea: XSP_004070
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Entry
XSP_004070 CDS
T07902
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
xeu
Xanthomonas euroxanthea
Pathway
xeu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xeu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
XSP_004070 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xeu03400
]
XSP_004070 (recD)
Enzymes [BR:
xeu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
XSP_004070 (recD)
DNA repair and recombination proteins [BR:
xeu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
XSP_004070 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
RecD_N
Viral_helicase1
AAA_11
UvrD-helicase
SH3_13
Helicase_RecD
UvrD_C
AAA_22
T2SSE
AAA_16
DEAD
nSTAND3
AAA_28
SLFN-g3_helicase
AAA_29
Motif
Other DBs
NCBI-ProteinID:
CAD1797656
UniProt:
A0A8E4EBB4
LinkDB
All DBs
Position
1:complement(4857958..4860372)
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AA seq
804 aa
AA seq
DB search
MNQPNLFSALIKADTLRPLDLALAQSLQRLAPDTDPQVLAGAALASLAVTSGHAGLDPAR
AAMLLDAREGPSPALPDPADWQRTLAASRWVDQPAPEDPAAADCPLVLEHGLLYLRRYRE
YERRLALGLQRIAAQSPPPFDAATLAPLFAQLFPNPTPATHPVDPTPLPPGEGARRAGEG
TGLPGLSVHQEGTAPPAPSVYQDGTHPPAPSHHQDRQAQAAALALRRTLLLVTGGPGTGK
TTTIARLLLLRIAQAHASNTPAPRIALAAPTGRAAERMAESLRLAVARAIADGIQLAPTP
AAAAPGQAKPSPHPVASPPHQVTEPPHPVASPLLQAPEPANPAVSPLPQAGEGARRAGEG
QPSTWNSLLPTGASTLHRLLGVIPDSPNFRHNADNPLPFDLIVVDEASMVDLPLMCKLVE
AVADGTQLILLGDADQLPSVEAGDVLAAILQAAGPGDTLQPQDAQALQPLLGNAPGDTTP
AATHSGGLAGHRVHLLRGYRQAHDFALAPLADAVRAGDADTALALLRSGELAGVHFHEDG
EDPLTLGRDALLAHWRALADAHDPAAALRDAARLRLLTAVRAGPQGARGLNARIEQLLAE
TGSGARRLGSASPWFQGRLLLITENSYRHGLFNGDVGICLRSDASPSPGRSDEGPSSAPG
QPGGTANRRDPGTDSRAQGPLVAWFEGDGDGQVRGFHPAALPAHESAFAMTVHKAQGSEF
DTVWLQLPTRDARVLSRELLYTGITRARRALHLAGSEAVIRSALARHAARISGLAWRLGA
QQQAAPAKQATEPSTALPVQGSLF
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagccaaacctcttcagcgccctgatcaaggccgacacgctacgcccgctggat
ctggcgctcgcgcaaagcctgcaacgcctggccccggacaccgacccccaggtcctggcc
ggcgctgcgctcgcctcgctggccgtcaccagcggccacgcagggctggaccccgcccgc
gccgccatgctgctggacgcgcgcgagggcccatcgcccgcactgccggaccccgccgac
tggcagcgcaccctggccgcctcgcgctgggtcgaccagccggctccggaagaccccgcc
gccgccgactgcccgttggtcctggaacacggcctgctctacctgcgccgctaccgcgag
tacgaacgccgcctggcgctgggcctgcaacgcatcgccgcccagtcgccgccgcccttc
gacgccgccacgctggccccgctattcgcacagctattcccaaacccgaccccagccact
caccccgtggacccaacccctctccccccgggagagggtgcccgaagggcgggtgagggt
acgggcctgcccgggctatctgtccaccaagagggtacggccccgcccgcgccatccgtc
taccaagacggcacgcacccgccggccccatcccaccaccaggaccgccaggcccaggcc
gccgccctggcgctgcgccgcaccctgctgctggtcaccggcggccccggcaccggcaag
accaccaccatcgcccgcctgctgctgctgcgcatcgcccaggcacacgcctccaacacc
ccggcaccgcgcatcgccctggccgcgcccaccggccgcgccgccgagcgcatggccgag
agcctgcgcctggccgttgcccgcgccatcgccgacggcatccagctcgcacccaccccc
gctgcagccgcgcccgggcaagcgaagccgtcgccgcaccccgtcgcctcccctccccat
caagtgacagagccaccgcaccccgtcgcttcccctcttcttcaagcgccagagccagca
aaccccgctgtttcccctctcccgcaagcgggagagggtgcccgaagggcgggtgagggc
cagccgtccacctggaactccctcctccccaccggcgccagcactctccaccgcctgctc
ggtgtcattcccgattccccgaacttccgccataacgcggacaatccgctgcctttcgac
ctgatcgtggtcgacgaagcctccatggtcgacctgccgctgatgtgcaagctggtggaa
gccgtggccgacggcacccagctgatcctgctcggcgatgccgaccagctgccctcggtg
gaagccggcgacgtgctcgccgccatcctgcaggccgccggccccggcgacaccctgcag
ccgcaggatgcacaggcgctgcaaccgctgctcggcaacgcgcccggcgataccacgccc
gccgccacccacagcggcggcctggccggccaccgcgtgcacctgctgcgcggctaccgt
caggcgcacgacttcgcactggccccgttggccgacgccgtgcgcgccggcgatgccgac
accgccttggcgctgctgcgcagcggcgagctggccggcgtgcacttccacgaagacggc
gaagacccgctcaccctgggccgcgacgcactgctcgcgcactggcgcgcgctggccgac
gcgcacgacccggccgctgccctgcgcgatgccgcgcgcctgcgcctgctcaccgccgtg
cgcgccggcccgcagggcgcacgcggcctcaacgcccgtatcgaacaactgctggccgaa
accggctccggcgcccgccgtctcggcagcgcctcgccctggttccagggccgtctgctg
ctgatcaccgaaaacagctaccgccacggcctgttcaacggcgacgtcggcatctgcctg
cgaagcgacgcgagtccctccccggggcgcagcgacgaaggtccctcgtcagcgccaggc
cagcccggcggcaccgccaaccgccgtgacccaggcaccgacagccgtgctcaaggcccc
ttggtcgcctggttcgaaggcgacggcgacggccaggtgcgtggcttccaccccgccgca
ctgcccgcgcacgaaagcgccttcgccatgaccgtgcacaaggcccagggcagcgaattc
gacaccgtctggctgcaactgcccacccgcgacgcccgcgtgctcagccgcgaactgctc
tacaccggcatcacccgcgcccgccgcgccctgcacctggccggcagcgaagcggtcatc
cgcagcgcgctcgcccggcacgccgcgcgcatctcgggcctggcgtggcggttgggtgcg
cagcagcaggcggcacccgccaagcaagcaacagaaccatccactgcgttgcctgtgcag
gggtcgttgttctga
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