KEGG   Xylella fastidiosa 9a5c: XF_0089
Entry
XF_0089           CDS       T00033                                 
Name
(GenBank) host factor-I protein
  KO
K03666  host factor-I protein
Organism
xfa  Xylella fastidiosa 9a5c
Pathway
xfa02024  Quorum sensing
xfa03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:xfa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    XF_0089
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    XF_0089
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xfa03019]
    XF_0089
   03036 Chromosome and associated proteins [BR:xfa03036]
    XF_0089
Messenger RNA biogenesis [BR:xfa03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     XF_0089
Chromosome and associated proteins [BR:xfa03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    XF_0089
SSDB
Motif
Pfam: Hfq LSM Hfq_1
Other DBs
NCBI-ProteinID: AAF82902
UniProt: Q9PH57
LinkDB
Position
complement(89712..89990)
AA seq 92 aa
MAKGQSLQDPFLNALRRERVPVSIYLVNGIKLQGTIESFDQFVVLLRNTVSQMVYKHAIS
TVVPARNVRVGPGGGYVQSGSDTLQINDDEVE
NT seq 279 nt   +upstreamnt  +downstreamnt
atggctaaggggcaatctttacaggatccttttctaaacgcattgcgtcgcgaacgggta
cctgtgtcgatctatctagtgaatggcatcaaactacaaggcacaatcgaatcattcgat
caatttgtggttctactacgtaatactgtcagccagatggtgtacaagcatgctatttcc
acagtggtacctgcgcgcaacgtacgagttgggccaggtggaggctatgtgcagtcaggc
agtgatacgttgcaaattaacgatgacgaagtggaatga

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