Xylella fastidiosa 9a5c: XF_0116
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Entry
XF_0116 CDS
T00033
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
xfa
Xylella fastidiosa 9a5c
Pathway
xfa00300
Lysine biosynthesis
xfa01100
Metabolic pathways
xfa01120
Microbial metabolism in diverse environments
xfa01230
Biosynthesis of amino acids
Module
xfa_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
xfa00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
XF_0116
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xfa01002
]
XF_0116
Enzymes [BR:
xfa01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
XF_0116
Peptidases and inhibitors [BR:
xfa01002
]
Metallo peptidases
Family M20
XF_0116
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M18
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
AAF82929
UniProt:
Q9PH30
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All DBs
Position
111713..112846
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AA seq
377 aa
AA seq
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MSEVFDLTCDLISRPSVTPEDAGCQAMIAARLERVGFTCEHLHYGSVANLWATHGQGAPV
LVLLGHTDVVPPGPIEAWTSDPFIPQRREGKLYGRGAADMKGSVAAFVIAAERFLVAHAG
HPGTLAILLTSDEEGQAIDGVRKVAETLRQRGQGIDWCLTGEPSSSKRLGDLLRVGRRGS
LSATLHVKGVQGHVAYPHQARNPIHLAVPALAALTARHWDDGDESFPSTSLQISNIHAGT
GANNVIPGALEVAFNLRYNPHWSAPRLESEIVALLDQHGLDYTLHWHRSGEPFYTPEGKL
RRIAREVLERFSGAPPEESTGGGTSDARFIAPLGAQCIEIGPVNASIHQVDEHVCLADLE
ALPDLYQLLIERLLADH
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagtgtttgacctgacctgtgatctgatctccaggccttccgtgacaccagaa
gatgccggctgccaagccatgattgcagcgcgtctagagcgtgtcggcttcacctgtgaa
cacctgcattacggttccgtcgccaacctatgggccacacatggacagggtgcgccggtg
ctagtgctactgggtcacacggatgtggtccctcccggtccaattgaagcgtggacttcg
gacccgtttatcccacagcgacgcgaaggcaagctctacggacgtggcgctgcggatatg
aaaggcagtgtggctgcattcgtgattgctgccgagcgcttcttagtcgcccatgctggg
catcccggaaccttggcgatcttactgacctctgatgaagagggccaagcaatagatggt
gtccgtaaagtggccgagacgttacgccagcgtggtcagggtattgattggtgcttgact
ggtgaaccgtcttcgagcaaacgactgggtgacctgctgcgggtcggccgtcgtggcagt
ttgtcggcaacgcttcacgtgaagggcgtccagggacatgttgcctatccccatcaagca
cgcaaccccattcacctcgccgtacctgcgctcgctgcattgacggcgcggcattgggat
gacggtgatgaatccttcccgtcaaccagcttgcagatcagcaatatccacgctggaacc
ggtgccaacaacgtgattcctggtgcactggaggttgctttcaatctgcgttacaacccg
cattggagcgccccgcgcttggagagtgagattgtcgcattactcgatcaacacgggctg
gactataccttgcactggcatcgtagcggtgagccgttctataccccggaaggaaaatta
cgtcgcatcgcacgtgaagtattagagcgtttttccggcgcacctccggaagaaagcacg
ggcggcggcacgtccgatgcgcgttttattgccccactgggcgcgcaatgtattgagatt
ggaccggtcaacgccagcattcaccaggttgatgagcatgtgtgcctggccgacttggaa
gccctgccagacctgtaccagttgctaattgagcggttgcttgctgaccattga
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