Xylella fastidiosa 9a5c: XF_0237
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Entry
XF_0237 CDS
T00033
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
xfa
Xylella fastidiosa 9a5c
Brite
KEGG Orthology (KO) [BR:
xfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xfa03016
]
XF_0237
Enzymes [BR:
xfa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
XF_0237
Transfer RNA biogenesis [BR:
xfa03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
XF_0237
Prokaryotic type
XF_0237
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AAF83050
UniProt:
Q9PGR1
LinkDB
All DBs
Position
249223..250131
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AA seq
302 aa
AA seq
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MLMSRIAYCRLDGILLLDKPAGISSNSALQIARRLLRAKKGGHTGSLDPLATGLLPLCFG
EATKIAGLLLGSTKAYDADVLLGTTTTTDDAEGAVLLTRPVPTLDAEMVDAVIPQLIGRI
RQRAPIYSALKQGGEPLYAKARRGEVVNAPVREVEVHAIELLVLATPRLQLRVTCGSGTY
IRSLVRDLGEILGCGAHITALRRRWVAPFQIPKMLTLDALEQALSAGRDPDSLLLPLVEG
LAGFPALELDAQRLACFRLGQRLRDHSFQTGRVAVFSRDGIPAGLGEVDSEGLLVPQRLF
NL
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
ttgcttatgtctcgcattgcctattgtcgtttggatggtattttgctgcttgataagcca
gctggcataagttctaacagtgcgttacagatcgcgcgtcggttattgcgagctaaaaag
ggggggcatactggtagcttggatccactcgctactggattgttgccgctgtgttttgga
gaagccaccaaaatcgctggtttgctattgggttctactaaggcatacgacgctgacgtg
ctactcggcaccacgacgacgactgatgatgctgaaggggctgtgttacttacgcgccct
gtgccgacgttggatgccgaaatggttgatgccgtgatacctcaattgattggtcgaatt
aggcaacgtgccccaatctattctgctctcaaacaggggggtgaacctttatatgctaaa
gctcggcgtggtgaagtggtcaatgccccggtacgtgaggttgaggtgcatgcgatcgaa
ttgcttgttttggctacgccgcgattacaattacgtgtgacttgcggttcgggtacatat
atccgtagcctagttcgcgatttgggcgaaatcttgggctgcggcgcacatatcactgca
ttgcgccgtcgttgggtcgctccatttcagataccgaagatgttgacattggatgcattg
gagcaggcattgagtgcagggagagatcctgattctctgttattgccattggttgaagga
ttagctggtttcccagcgctggagcttgatgcccagcgtctagcttgcttcaggctaggg
cagcgcttgcgcgatcatagtttccagactgggcgggttgcggtgttcagtcgagatggt
atccctgcggggctgggagaggtggatagtgaaggcttgttggtgccgcagcgtcttttc
aatctttga
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