Xylella fastidiosa 9a5c: XF_0287
Help
Entry
XF_0287 CDS
T00033
Name
(GenBank) regulator of pathogenicity factors
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
xfa
Xylella fastidiosa 9a5c
Pathway
xfa00061
Fatty acid biosynthesis
xfa01100
Metabolic pathways
xfa01212
Fatty acid metabolism
xfa02024
Quorum sensing
xfa04146
Peroxisome
Module
xfa_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
xfa00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
XF_0287
00071 Fatty acid degradation
XF_0287
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
XF_0287
09145 Cellular community - prokaryotes
02024 Quorum sensing
XF_0287
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
xfa01004
]
XF_0287
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xfa04147
]
XF_0287
Enzymes [BR:
xfa01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
XF_0287
Lipid biosynthesis proteins [BR:
xfa01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
XF_0287
Exosome [BR:
xfa04147
]
Exosomal proteins
Exosomal proteins of breast milk
XF_0287
Exosomal proteins of breast cancer cells
XF_0287
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
PUA_4
Motif
Other DBs
NCBI-ProteinID:
AAF83100
UniProt:
Q9PGL1
LinkDB
All DBs
Position
complement(298786..300495)
Genome browser
AA seq
569 aa
AA seq
DB search
MSQTRPWLQHYPSGISTEIDTDAFRTIADVFDTSVIKYRHCPAYTNFGKTLTYGEVDLLT
KQFASYLLNVLKLKKGDRIALMMLNCLQYPVATFGALCAGLTVVNVNPLYTARELKHQLV
DAGSTVLVVMDNFCTTVQQIIADTPIKQVITTELGDLLDFPKRSLINFAVKHIKKLVPEY
QLPRSIRFREALALGSKHSMPPIHIASDDLAFLQYTGGTTGTPKGAMLTHRNMVANMQQV
SQWLQTSNSLKEGCETVLTALPLYHIFALTANSLVFMKIGGCNHLISNPRNMRTFVKELQ
RVRFTVITGVNTLFNKLLNTPGFDKLDFSSLKIALGGGMVIQRSVAEQWKQVTHVPLIEA
YGLTEASPEACINPLNLQEHNGSIGMPIPSTDVCIKDDTNTALPIGEMGELCIKGPQVMK
GYWQRPEETSEVLDADGWLHTGDIVKMDKQGFLYIIDRKKEIILVSGFNVYPKEIEEVIA
MIPGVAEVAAVGVPDEQSGEVVKVVIVKKDPMLTAEEVKAHAATNLTRYKLPRIIEFRAT
LPKTDVGKILRRELRDAAPASTTFTAQPK
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaaacacgtccttggctgcaacactatccatcgggaatctcaacagagattgat
actgacgctttccgtactatcgctgatgtcttcgatacatcagtcatcaaatatcgtcat
tgtcccgcctataccaatttcgggaaaacacttacctacggcgaagtcgatctattaaca
aaacaattcgccagctatctgctcaatgtgttgaaactcaaaaagggcgaccgaatcgca
ctgatgatgctcaactgtttgcaatatccagtagcgaccttcggcgcgctatgcgccggg
ttaactgttgtcaatgtcaaccccctctacacagcgcgcgaactcaagcaccaactggtt
gacgcagggagcactgtattggtggtcatggacaacttctgtacaactgtgcagcagatc
attgctgacaccccaatcaaacaggtgattacgactgaattaggcgacctgctcgatttc
cccaaaagatcactgatcaattttgccgtcaagcacatcaaaaaattagtaccggaatac
caactgcctcgctcaatccgcttccgtgaagcactcgcgctgggaagcaagcattccatg
cctccaatccacatcgccagcgacgatttagcttttctacaatacaccggcggcacaacg
gggacacccaaaggcgcaatgctgacccacagaaatatggtcgcgaatatgcagcaggtg
tcgcagtggctccaaacaagcaacagtctcaaagaaggctgtgaaacagtgctcactgct
ctaccgctgtatcacatttttgcgttaaccgcgaacagcttagtctttatgaaaatcggt
ggttgcaaccatctgattagcaatccacgcaacatgcgaacattcgtcaaagagttgcaa
cgcgtccgcttcactgtcatcactggagtcaacacactgttcaataaactccttaacacc
ccgggcttcgacaaacttgatttctcttctctgaagattgccctgggtggcggcatggtg
atccagcgctccgtcgccgaacagtggaagcaagttactcatgttccgctgattgaagct
tacggacttaccgaggcatcaccagaggcatgcatcaatccgctgaatctgcaagaacat
aacggttcgatcggtatgccgatccctagtactgatgtctgtattaaagatgacactaac
accgcattacctataggcgaaatgggcgaactgtgtattaaaggtccacaagtgatgaaa
ggctactggcaacgcccagaagaaacttcagaagtgttagatgcagacggttggctgcat
actggggacattgtcaaaatggacaaacaagggtttctgtacatcatcgaccgtaagaaa
gaaatcattcttgtctctggcttcaacgtctatccgaaggaaatcgaagaagtcatcgca
atgatcccaggcgtggctgaagtcgctgcggttggagtcccggacgagcagtccggcgaa
gtcgttaaggtagtcattgtcaaaaaggatcccatgctgaccgctgaggaagtaaaggcg
catgctgcgaccaacctgaccagatacaagctaccacgcatcattgagttccgtgcaaca
ctccctaaaaccgatgttggcaagattttgcggcgcgaattgcgagacgcagcaccggca
tcaaccacattcacagctcaacccaagtag
DBGET
integrated database retrieval system
